Dipa Sashital
@dsashital.bsky.social
400 followers 190 following 9 posts
Professor of Biochemistry at Iowa State University. Exploring CRISPR biology, mechanisms and structures
Posts Media Videos Starter Packs
Reposted by Dipa Sashital
peterfineran.bsky.social
Ever wondered why some bacteria have multiple CRISPR-Cas systems? Our new study led by Leah Smith shows how type I CRISPR systems can promote the acquisition and retention of new spacers into a co-occuring type III system. www.sciencedirect.com/science/arti...
Type I CRISPR-Cas immunity primes type III spacer acquisition
CRISPR-Cas systems are diverse, with microbes harboring multiple classes and subtypes. Type I DNA-targeting and type III RNA-targeting systems often c…
www.sciencedirect.com
Reposted by Dipa Sashital
amyweeks.bsky.social
New preprint: we developed a method that uses phosphoproteome-derived peptide libraries (PhosPropels) for deep specificity profiling of phosphatases and phospholyases www.biorxiv.org/content/10.1...
Position-specific frequency matrices can be used to calculate z-scores comparing enzyme-treated and control samples. The z-scores are plotted as heatmaps that represent an enzyme specificity profile.
Reposted by Dipa Sashital
peterfineran.bsky.social
Was my pleasure to chair the #crispr2025 meeting earlier this year in my hometown in NZ @crisprmeeting.bsky.social
Reposted by Dipa Sashital
jbdsf.bsky.social
Interested in phage defenses that natively block lytic phage used in therapies?

Or do you want to figure out if a phage has a modified genome?

Meet the END-nucleases, an enzyme family that can broadly restrict phages with many diverse modifications. From talented post-doc Wearn-Xin Yee!
Reposted by Dipa Sashital
Reposted by Dipa Sashital
Reposted by Dipa Sashital
amyweeks.bsky.social
My contribution to the Science Homecoming project--I wrote to The Item in Clinton, MA about the impacts that cuts to science funding will have on our health, our economy, and the opportunities available to young people in Clinton www.clintonitem.com/writes-cuts-...

@sciencehomecoming.bsky.social
Reposted by Dipa Sashital
cellraiser.bsky.social
Finally, in these tough times for science I want to emphasize how this work was supported at every level by NIH: through grants to my lab (DP2); to my students (BTP T32; CBI T32); and from Rohith’s experience as an NIH Postbac in the Tjandra lab. Grateful for the support that made this possible.
Reposted by Dipa Sashital
cellraiser.bsky.social
Excited to share a new preprint! Wireless devices use FM modulation to transmit multiplexed noise-resistant data. Led by @born2raisecell.bsky.social, we create a biochemical analogue of this paradigm using genetically encoded oscillators (GEOs) for single-cell FM streaming tinyurl.com/nbs8rw42 🧵
Reposted by Dipa Sashital
Reposted by Dipa Sashital
crisprmeeting.bsky.social
If you were on the fence about coming to CRISPR 2025 let us add that Christchurch airport is well connected internationally and from there you can explore many grand sights in the South Island, NZ. Register now and book a conference trip to NZ hashtag#CRISPR2025 lnkd.in/gaSkt-Ng
Reposted by Dipa Sashital
amyweeks.bsky.social
Happy Holidays from the Weeks lab! This year's ornament is a working ferris wheel 🎡☃️
Reposted by Dipa Sashital
kaplan.bio
Matias @kaplan.bio · Dec 11
Really beautiful RNA structures from Rachel Kretsch in the Das and Chiu groups

These look like viral capsids but they're only RNA!! Hopefully this unlocks more work on "ornate" RNAs 🧪

www.biorxiv.org/content/10.1...
figure from the paper showing a reconstruction of an RNA-only capsid-like molecule
Reposted by Dipa Sashital
crisprmeeting.bsky.social
Meet one of our speakers: Elizabeth Kellogg is an assistant professor in the department of Molecular Biology and Genetics at Cornell. There's still time to register and get to hear Elizabeth speak at CRISPR 2025 in Ōtautahi, Christchurch, NZ. lnkd.in/gds9sURN
dsashital.bsky.social
Yeah, I remember when it happened, it freaked me out! Still lodged in my memory I guess
dsashital.bsky.social
The tsunami from the 2011 Japanese earthquake entered the bay (at a height of 1 foot). Also, stay safe!
2011 Japanese tsunami in the SF bay
Reposted by Dipa Sashital
olivierduss.bsky.social
First paper of our lab today @natureportfolio.bsky.social by Nussi!

We provide a real-time movie on how #transcription and #translation cooperate using #single-molecule FM: we find long-range #ribosome/ RNAP communication mediated by #RNA looping!

@embl.org #RNAbiology #RNASky

t.co/a24Xxcxdo0
Reposted by Dipa Sashital
naamaaviram.bsky.social
It’s a wrap! The final version of our paper is out 🎉 where we characterize the multifaceted response of the transcript-activated type III CRISPR-Cas immunity. Here’s a skytorial (bluetorial?) by my awesome co-lead @akshilton.bsky.social

#RNA #RNAsky #WomenInSTEM
akshilton.bsky.social
Incredibly proud to share my thesis work, co-led by @naamaaviram.bsky.social available now at Cell Host Microbe! Cells use growth arrest as a defense against stress and viruses. Here we thoroughly characterize the arrest associated with CRISPR Type III immunity. www.cell.com/cell-host-mi...
DEFINE_ME
www.cell.com
Reposted by Dipa Sashital
crisprmeeting.bsky.social
Rumour is there are cheaps flights from North America to NZ at the moment 👀✈️- get in quick and book your flights now for CRISPR 2025. Registrations are still open and we would love to see you. The airport is just a short trip to the city! crispr2025.org/registration