nicky nicolson
@nickynicolson.bsky.social
200 followers 100 following 13 posts
👋 Software developer turned biodiversity informatics researcher: I use collaborative #OpenScience practices to build tools, analyse & mobilise natural history specimen data - at Kew & with partners worldwide. Fellow at Software Sustainability Institute.
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Reposted by nicky nicolson
petermoonlight.bsky.social
Calling botanical researchers, the School of Natural Science at Trinity College Dublin is hiring a tenure track Assistant Professor in Plant Biodiversity and Conservation.

I know this is someone's dream job, so let me know if that is you and you want to chat!

my.corehr.com/pls/trrecrui...
Trinity College Dublin Herbarium
nickynicolson.bsky.social
Here's your reach @turingway.bsky.social 😎supporting botanical research into the plant families that give us potatoes and coffee
bombarelya.bsky.social
@sandyknapp.bsky.social opens the #SOLRUB2025 meeting talking about how wonderful are #Solanaceae species. New dating results are coming out soon. The family is older that we thought. Almost 90 MY. She closes her presentation talking about the importance of community.
Reposted by nicky nicolson
society-rse.org
Great closing quote from Graham Lee in this mornings Track A talk on Where do people come from?

"RSE is more than a technical discipline, its a social movement aiming to revolutionise how research engages with software." - Graham Lee

#RSECon25
nickynicolson.bsky.social
Sorry to miss #RSECon25 - are the talks (or at least the keynotes) being recorded for later viewing?
nickynicolson.bsky.social
I don't know if "punlishing" is intentional - but its a lovely neologism 😂
Reposted by nicky nicolson
annamazz.bsky.social
It’s Mary Anning’s birthday, so time to share @katebeaton.bsky.social’s brilliant cartoon again.
Reposted by nicky nicolson
nikosirmpilatze.com
Still a few weeks to register for some hands-on training and hacking on open-source tools for analysing animal motion, whole-brain microscopy with @brainglobe.info, and big imaging data. 🧠📈

Aug 11-15 at @sainsburywellcome.bsky.social in London.

"Free as in beer" and travel stipends available.
neuroinformatics.dev
We're excited to announce the Neuroinformatics Unit Open Source Week, August 11-15 2025 in London, UK.

Bringing together researchers and developers of open-source software for training, community-building and hacking.

No cost and travel stipends available.

neuroinformatics.dev/open-softwar...

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Reposted by nicky nicolson
hiddenref.bsky.social
📢 Registration is now open 📢

Join us on 7-8 October 2025 at Thinktank, Birmingham Science Museum for the second Festival of Hidden REF!

Explore the indicative schedule, learn more on our website or head straight to the registration page to secure your place! www.eventbrite.co.uk/e/the-festiv...
Image of Thinktank Birmingham Science Museum with Hidden REF Festival logo and text '7-8 October 2025 Thinktank Birmingham, Registration is open!'
Reposted by nicky nicolson
mdsimpson.co.uk
We're not "over-diagnosing", we're getting BETTER at diagnosing. That was the point of all those years of research.

And yes, more people are self-diagnosing, but that's because they are better informed. That was the whole point of raising awareness! #MentalHealth
Reposted by nicky nicolson
bstaggmartin.bsky.social
Okay, I'm probably preaching to the choir here, but BHL is an absolutely VITAL resource for ecologists and evolutionary biologists. There's no other database I'm aware of that provides digital access to species descriptions dating all the way back to the 1800s and beyond.
Reposted by nicky nicolson
isabelott.bsky.social
Oh no - I use BHL collections multiple times a week for my work 😭 it’s open access & the only place the old American Mosquito Control Association journal (Mosquito News) are kept, with a ton of work on disease vector surveillance, ecology, their pathogens, you name it. God.
chasesolidago.bsky.social
In addition to EVERY-FUCKING-THING ELSE

The most vital of tools, the Biodiversity Heritage Library, is apparently homed at the Smithsonian. For obv reasons, the Smithsonian cannot retain it

For free, you can access biodiversity-related texts going back to the 1400s!

www.biodiversitylibrary.org
About the Biodiversity Heritage Library

The Biodiversity Heritage Library (BHL) is the world’s largest open access digital library for biodiversity literature and archives. BHL is revolutionizing global research by providing free, worldwide access to knowledge about life on Earth.

To document Earth’s species and understand the complexities of swiftly-changing ecosystems in the midst of a major extinction crisis and widespread climate change, researchers need something that no single library can provide — access to the world’s collective knowledge about biodiversity. While natural history books and archives contain information that is critical to studying biodiversity, much of this material is available in only a handful of libraries globally. Scientists have long considered this lack of access to biodiversity literature as a major impediment to the efficiency of scientific research.
Reposted by nicky nicolson
The most meaningful work of my career has been the 17.5 years I have spent with the Biodiversity Heritage Library. Now BHL faces new challenges, and seeks funding and support. Please share this message, and reach out if you can help.

#ILoveBHL
biodivlibrary.bsky.social
Change is in the air for BHL! In 2026, BHL hosting will transition away from the Smithsonian, opening doors to reimagine our future. Rest assured, our 63 million pages of biodiversity knowledge remain secure and accessible.
Learn what's next for BHL ➡️
A New Future for the Biodiversity Heritage Library
The Biodiversity Heritage Library (BHL) is the world’s largest open access digital library for biodiversity literature and archives. A global consortium of over 660 contributors, BHL has made more …
blog.biodiversitylibrary.org
Reposted by nicky nicolson
biodivlibrary.bsky.social
Today we celebrate the incredible biodiversity of our planet – and the power of #OpenAccess to protect it. The Biodiversity Heritage Library makes over 62 million pages of biodiversity knowledge freely available to all. 🔗 biodiversitylibrary.org
#EarthDay #EarthDay2025 #Biodiversity #BHLib
A screenshot of the Biodiversity Heritage Library (BHL) website homepage
nickynicolson.bsky.social
You're a braver man than me! I'm not sure could re-read #ProphetSong
nickynicolson.bsky.social
😱 ...do you think that we should try to compile a dataset of extreme variations to test AI identification approaches?
nickynicolson.bsky.social
Thanks! Are any of this group going to the @softwaresaved.bsky.social collaborations workshop this year? Maybe we could catch up there if so
Reposted by nicky nicolson
retropz.bsky.social
Last few days to apply #Metascience post @uniofmanchester.bsky.social working with James Bird, @naubertbonn.bsky.social, Prof Andrew Stewart & me to investigate opportunities and barriers in deploying Electronic Research Notebooks (ERNs)

www.jobs.manchester.ac.uk/Job/JobDetai...

#ELN #OpenResearch
Text reads: We are recruiting a Research Associate for an exciting UKRI Metascience project

Support researchers in moving from traditional methods of recording research......to digital-first Electronic Research Notebooks......enhancing data sharing, FAIR principles, re-use and collaboration

Images show a person writing in physical notebook, holding a tablet computer while wearing lab gloves, and a big image of a blue 'share' button on a computer keyboard

Apply by 24th March, Job reference: SAE-028173
nickynicolson.bsky.social
Good luck with your recruitment!
Is there anywhere I can read more about the ERN project? This seems pretty relevant for how working practices are evolving in taxonomy as our specimens and literature are digitised
Reposted by nicky nicolson
softwaresaved.bsky.social
👥 If you have written software, code or scripts for research purposes and are from an underrepresented group in research software, we would like to hear from you! Find out how to get involved in our inclusive RSE study at www.software.ac.uk/news/partici...
SSI Logo, red people holding hands
nickynicolson.bsky.social
💪 An anti-acknowledgement:
"No thank you to the people who have called me scary instead of strong and intimidating instead of intelligent"
adrianaguatame.bsky.social
A friend included this anti-acknowledgement section on her PhD thesis. She also added the proposition: “Systematic bullying and undermining of girls and women in STEM starts early on and is the reason why they do not stay in science and related fields.”
Absurd we still need to go through this
🧪👩‍🔬
There have been people less than helpful in my journey here. I wanted to acknowledge those too, bc I know I am not unique in this experience.
No thank you to the physics study assoc that made me sing songs about how women couldn't study physics without sleeping with the professor, the day I stepped into university life. No thank you to the 5th year physics student that decided to assign me a stripper name within the first minute of meeting me in the physics coffee corner in my first year. No thank you to the technician that was responsible for onboarding me on the use of the cluster in my third year who raised his eyebrows and asked me if that meant I was some sort of computer girl. No thank you to the senior researcher that sent me utterly inappropriate texts after a conference, then proceeded to apologise months later by telling me they had not been meant for me anyway so no hard feelings remain hopefully And no thank you to him for attending every conference I've been to since. No thank you to the people who told me that it was surprising that I was doing a PhD since I was a girl. No thank you to the man who mistook me for a coffee lady at a conference, and after having to correct him two times that I did not work there, responded with you should consider it. No thank you to the researcher that asked me what I was wearing underneath my outfit during a conference. No thank you to the physicist who declared to a room full of other physicists that biologists don't know how to design an experiment. No thank you to the people who have called me scary instead of strong and intimidating instead of intelligent.
And finally, no thank you to the exec board of the TU Delft, whose knee-jerk reaction to being held up a mirror about the social safety at the university, was to sue the party holding up the mirror instead of looking at the problems they highlighted.
... You have made me feel like I do not belong in science & I cannot forgive you for that.
nickynicolson.bsky.social
fietkau.me
I'm finally unveiling the #activitypub project that has been consuming my weekends: Encyclia, an #orcid bridge that will make ORCID records followable and interactable on the fediverse. 🙂

It's early-stage and the ORCID following function is not publicly available yet. We're seeking community […]
Original post on fietkau.social
fietkau.social
Reposted by nicky nicolson
gbif.org
GBIF @gbif.org · Feb 13
Session and workshop submission deadline extended for #LivingData2025!

📌New deadline: Friday 14 February 23:59 GMT-5

🔗www.livingdata2025.c...

#DatosVivos2025

@tdwg.org @gbif.org #OBIS @geobon.org BON #InstitutoHumboldt
White graphic with living data 2025 logo and logos of tdwg gbif geobon obis and humboldt institute
Reposted by nicky nicolson
davidbeavan.bsky.social
Want cutting-edge digital research? Then you want Research Software Engineering. Only a couple of days left to contribute to the evidence base for Research Software Engineering and the impact it brings
davidbeavan.bsky.social
🚨 Calling all who care about digital research! 🚨 Share examples of the impact Research Software Engineering or RSEs have had on (your) research. Help us build an evidence base and a bright future for the field. Deadline: Fri, 14 Feb ⏰. Share & spread the word! 🙌 forms.office.com/Pages/Respon...
Microsoft Forms
forms.office.com