rijazaidi.bsky.social
Rija Zaidi
@rijazaidi.bsky.social
57 followers 100 following 3 posts
PhD Student | Computational Cancer Genomics Lab | UCL Cancer Institute W: https://sites.google.com/view/ccgresearchgroup/meet-the-team/rija-zaidi LinkedIn: https://uk.linkedin.com/in/rija-zaidi-a5220a227
sites.google.com
Posts Media Videos Starter Packs
rijazaidi.bsky.social
Rija Zaidi @rijazaidi.bsky.social · Jan 25
Hi, I’d like to be added if possible! Thank you!
rijazaidi.bsky.social
Rija Zaidi @rijazaidi.bsky.social · Dec 16
Of course!
3
rijazaidi.bsky.social
Rija Zaidi @rijazaidi.bsky.social · Dec 16
How much do algorithmic and experimental choices drive the accuracy of reconstructing tumour evolution?

In this Cancer Research commentary, @zaccasimo.bsky.social and I discuss a recent Nature Biotech benchmarking paper exploring this question:

bit.ly/3VAMRQs
Tumor Evolution Reconstruction Is Heavily Influenced by Algorithmic and Experimental Choices
Tumor progression is an evolutionary process during which cells acquire distinct genetic alterations. Several cancer evolutionary studies reconstruct this evolutionary process by applying bulk DNA seq...
bit.ly
3 8 32
Reposted by Rija Zaidi
zaccasimo.bsky.social
Simone Zaccaria @zaccasimo.bsky.social · Nov 29
🚨So proud to present the first study from our @ccg-ucl.bsky.social group together with @charlesswanton.bsky.social @NnennayaKanu and led by @ojlucas.bsky.social with key collaboration @sophie-ward.bsky.social and fundamental support @rijazaidi.bsky.social @abibunkum.bsky.social & others

Out now👇
🧵👇
Characterizing the evolutionary dynamics of cancer proliferation in single-cell clones with SPRINTER - Nature Genetics
Single-cell Proliferation Rate Inference in Non-homogeneous Tumors through Evolutionary Routes (SPRINTER) allows users to infer proliferation rates of individual clones within a tumor from single-cell...
doi.org
2 12 36