##proteinstructure
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cp-trendsbiochem.bsky.social
📝 Online now - the Review "Decoding protein structures with residue interaction networks" from Silvio Tosatto et al.

#RIN #ProteinStructure #ResidueCentrality #Allosterism #ArtificialIntelligence

Read it here: authors.elsevier.com/sd/article/S...
September 15, 2025 at 3:51 PM
scihans.bsky.social
#Cytochrome #NitrogenCycle #Spectroscopy #Catalysis #Heme #Haem #NitrousOxide #Hydroxylamine #Greenhouse #ProteinResearch #ScientificReview #Biochemistry #MolecularBiology #ProteinStructure #LifeSciences #ResearchInnovation #ScienceCommunity #AcademicPublishing #ProteinFunction
March 27, 2025 at 4:21 PM
jgp.org
NALCN/Cch1 channelosome subunits originated in early eukaryotes. New study from Adriano Senatore @utoronto.ca and colleagues: rupress.org/jgp/article/...

#Lipids #membranes #MolecularPhysiology #ProteinStructure #ProteinDynamics #CellBiology #Evolution #IonChannels
September 12, 2025 at 2:15 PM
playmolecule.com
Ready to start exploring your molecular structures?🔎 Just click on “Load files” and upload your proteins or small molecules. Watch the video to see it in action!🎬 #ProteinStructure #DataVisualization
November 26, 2024 at 3:21 PM
anhcaoimmuno.bsky.social
4️⃣ Ligand Binding Alters Caspase-11 Structure
CD analysis revealed a shift toward a more α-helical conformation upon binding non-aggregating ligands LPS-RS and PGPC. This suggests distinct ligand-induced structural changes. #Immunology #Caspase11 #ProteinStructure
March 8, 2025 at 2:19 PM
asbmb.bsky.social
Why is leadership in structural biology so important? Mark Hargrove shows us how impactful it can be.
www.asbmb.org/asbmb-...
#SciComm #StructuralBiology #ASBMBmemberNews #XRayCrystallography #ProteinStructure
Hargrove recognized for leadership
By tracking protein changes in stem cell–derived heart cells, researchers from Cedars-Sinai uncovered surprising diversity that could reshape how we study and treat heart disease. Read more about this recent Molecular & Cellular Proteomics article.
www.asbmb.org
June 16, 2025 at 8:16 PM
arxivlens.bsky.social
Amino acid exchangeability and surface accessibility underpin the effects of single substitutions
Alpay, B. A., Desai, M. M. et al.
Paper
Details
#AminoAcidSubstitutions #ProteinStructure #BiochemistryResearch
June 20, 2025 at 9:02 AM
ugsf-lille.bsky.social
🧬 New paper out from our Computational Molecular Systems Biology team at @UGSF-lille !
Proud to have contributed to the CAPRI 8 challenge

🔗 Read it here: onlinelibrary.wiley.com/doi/10.1002/...

#CAPRI8 #AlphaFold #ProteinStructure #StructuralBiology #AIinBiology #Bioinformatics #UGSF
Biomolecular Interaction Prediction in the Pre‐ and Post‐AlphaFold Era: The 8th CAPRI Evaluation
We report on the 8th CAPRI Evaluation period, capturing the assessment of CAPRI Rounds 47 to 55 (excluding the CASP and COVID-related Rounds), which have witnessed the transition to AI-driven predict...
onlinelibrary.wiley.com
October 6, 2025 at 11:47 AM
jgp.org
New review: Structural and functional insights into α-actinin isoforms and their implications in cardiovascular disease. From Maya Noureddine, Fiyaz Mohammed and colleagues: https://buff.ly/4jKxZtj

#ComputationalBiology #ProteinStructure #CardiacMuscle #Myofilaments
February 7, 2025 at 5:17 PM
plantenzo.bsky.social
One of the things that I am looking in at the moment is AlphaFold and protein structure and function prediction. So let me know your good, bad and everyting in between experiences.
#PlantScience #AlphaFold #ProteinStructure #Science
November 14, 2024 at 8:34 AM
electricbluesfan.bsky.social
6/12 Critical difference: The same mutations (N236K/Q238L) in wild-type H5N1 don't switch receptor specificity.

Only in B3.13 strain do these mutations enable human receptor binding. The conformational context matters enormously.
#ProteinStructure
August 26, 2025 at 2:56 PM
csbj.org
DEADLINE EXTENDED: The new deadline for submission of manuscripts for this special issue is 31 January 2025.

📝 Call for Papers: Special Issue on "AlphaFold in Protein Structure and Function Prediction".

🔗https://www.csbj.org/call_AlphaFold

#AlphaFold #ProteinStructure #ProteinFunction
December 7, 2024 at 8:51 AM
csbj.org
🧠 Can post-processing and deep learning push protein prediction to near perfection?

🔗 Post-processing enhances protein secondary structure prediction with second order deep learning and embeddings. DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#PSSP #ProteinStructure #ProtBERT #AlphaFold #AI
Post-processing enhances protein secondary structure prediction with second order deep learning and embeddings. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.12.022
April 16, 2025 at 1:03 AM
arxivlens.bsky.social
Allosteric and Energetic Remodeling by Protein Domain Extensions
Faure, A., Hidalgo-Carcedo, C. et al.
Paper
Details
#ProteinStructure #AllostericRegulation #BiochemistryResearch
July 30, 2025 at 4:01 PM
purescience.news
The protein structure problem: solving life’s origami #Science #Biology #MolecularBiology #ProteinStructure #LifeScience
The protein structure problem: solving life’s origami
The artificial intelligence program AlphaFold is proving to be a gamechanger for biological research, Imma Perfetto reports. This article was originally published in the Cosmos Print Magazine, September...
purescience.news
October 11, 2025 at 8:00 AM
jgp.org
#MolecularDynamics simulation of GJC2 mutants reveal pathogenic mechanisms of PMLD1 & SPG44. New study from David Gong, Charles Abrams (University of Illinois Chicago) et al: rupress.org/jgp/article/...

@jennoligomyelin.bsky.social
#ProteinStructure #Pathophysiology #ComputationalBiology #Connexins
June 17, 2025 at 3:16 PM
dgkontopoulos.ecoevo.social.ap.brid.gy
I am excited to introduce our new @EvolLetters paper that has just come out:

https://academic.oup.com/evlett/advance-article/doi/10.1093/evlett/qraf026/8223096

🧵1/7
August 6, 2025 at 5:09 PM
mtyka.bsky.social
Wow 🤯 - my former post doc advisor David Baker won the Nobel Prize for Protein Design. Huge congrats - well deserved! David and his lab have been a force of nature in protein design. Incredible watching the progress over the last 20 years. #NobelPrize2024 #proteindesign #ProteinStructure
October 10, 2024 at 7:13 PM
pdbeurope.bsky.social
The new DSSP version 4 uses mmCIF as its primary format and extends secondary structure detection to include left-handed polyproline II (κ) helices, common motifs that contribute to protein folding and stability.

Full announcement: www.ebi.ac.uk/pdbe/news/pd...

#PDBe #DSSP #ProteinStructure
PDBe adopts the new DSSP for protein secondary structure annotation | Protein Data Bank in Europe
Advanced Search
www.ebi.ac.uk
October 30, 2025 at 4:22 PM
alexkiryushkin.bsky.social
#AlphaFold #ProteinStructure vs metal sponge scrubber for dishes, find the difference :)
April 4, 2025 at 7:45 AM
woody-sherman.bsky.social
Exciting opportunity to see the main authors of Boltz-1 (Jeremy Wohlwend and Gabriele Corso @gcorso.bsky.social) present at #MIT on Thurs, Dec 5. Boltz-1 was shown to achieve SOTA performance at the level of AlphaFold3
#AlphaFold #drugdiscovery #proteinstructure
jclinic.mit.edu/events/boltz...
Boltz-1 Seminar – MIT Jameel Clinic
jclinic.mit.edu
December 2, 2024 at 6:00 PM
newsmedical.bsky.social
MassiveFold advances protein structure prediction with efficient parallel processing 🔬🚀📊 www.news-medical.net/news/2024111... #ProteinStructure #AlphaFold #A #Science #MassiveFold #ComputationalBiology #ProteinModeling #Bioinformatics #DrugDiscovery
MassiveFold advances protein structure prediction with efficient parallel processing
Researchers developed MassiveFold, an enhanced AlphaFold version optimized for parallel processing, which accelerates protein structure predictions from months to hours while increasing structural div...
www.news-medical.net
November 13, 2024 at 2:45 AM
katchwreck.mastodon.social.ap.brid.gy
`Recent research highlights the transition from a pathological to a functional perspective of amyloidfibrils, paving the way for innovative applications in biotechnology and materials science. By leveraging the self-assembly properties and biocompatibility of functional amyloids,advancements in […]
Original post on mastodon.social
mastodon.social
April 24, 2025 at 7:19 AM
sekmi.bsky.social
New in Nucleic Acids Research @narjournal.bsky.social:

CABS-flex 3.0 – a browser-based tool for simulating protein flexibility and predicting the 3D structure of short peptides.

Try it here: lcbio.pl/cabsflex3/
Read the paper: doi.org/10.1093/nar/...

#Bioinformatics #peptide #proteinstructure
CABS-flex 3.0: an online tool for simulating protein structural flexibility and peptide modeling
doi.org
May 26, 2025 at 5:37 PM