Alvascience
@alvascience.bsky.social
590 followers 420 following 320 posts
Software Solutions for Cheminformatics and QSAR https://www.alvascience.com/ #QSAR #cheminformatics #machinelearning #moleculardescriptors #compchem
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🚀 We’re pleased to introduce alvaQSAR, a new free web platform for predicting chemical properties using QSAR models.

alvaQSAR simplifies the process from structure input to report generation, no installation needed.
#descriptoroftheday #moleculardescriptors #qsar #cheminformatics #alvatips #chemsky

3D-MoRSE descriptors have been proposed in "The Coding of the Three-Dimensional Structure of Molecules by Molecular..." via @pubs.acs.org

doi.org/10.1021/ci95...

Check #alvaDesc at: alvascience.com/alvadesc/
Pandey & Roy (2025) apply read-across + ML to predict drug-induced cardiotoxicity using FDA DICTrank data 🧠

Descriptors from #alvaDesc enabled robust and interpretable models.

📄 doi.org/10.1016/j.in...
🔗 alvascience.com/alvadesc/

#QSAR #Cheminformatics #DrugSafety #InSilico #chemsky
#descriptoroftheday #moleculardescriptors #qsar #cheminformatics #alvatips #chemsky

RDF descriptors have been proposed in "Deriving the 3D structure of organic molecules from their infrared spectra" doi.org/10.1016/S092...

Check #alvaDesc at: alvascience.com/alvadesc/
Accessible in alvaQSAR, a free web platform offering predictive models for human health and environmental endpoints, each with detailed scientific documentation.

Try it out at: alvascience.com/alva/qsar/

#alvaQSAR #QSAR #Cheminformatics #Ecotoxicology #InSilico #ToxicityPrediction
alvaQSAR
alvascience.com
🔹 Key features:
• Fully validated following OECD principles (R² ≈ 0.65; Q² ≈ 0.63)
• Built-in applicability domain assessment
• Automatic QPRF reports (PDF) for transparent documentation
🔹 Included models:
• M1_KNN_MD – k-Nearest Neighbors based on molecular descriptors
• M2_KNN_ECFP – k-Nearest Neighbors using molecular fingerprints (ECFP)
• Consensus model – combines both for enhanced accuracy and robustness
Developed from a dataset of 546 organic compounds, these models estimate toxicity as –log(LC₅₀ [mol/L]) and apply validated similarity-based methods for reliable and interpretable predictions (Cassotti et al., 2014).
🦐 Predicting aquatic toxicity with the Daphnia magna QSAR models in alvaQSAR.

The Daphnia magna LC₅₀ (48 h) models provide a quantitative structure–activity relationship (QSAR) approach to predict acute aquatic toxicity according to OECD REACH Code 9.1.1.

Try it out at: alvascience.com/alva/qsar/
In J. Comput.-Aided Mol. Des. Nagare et al. (2025) developed robust QSAR models for FGFR-1 inhibitors, combining computational & experimental validation.
Descriptors from #alvaDesc
🔗 alvascience.com/alvadesc/
📄 doi.org/10.1007/s108...

#QSAR #cheminformatics #FGFR1 #drugdiscovery #chemsky
#descriptoroftheday #moleculardescriptors #qsar #cheminformatics #alvatips #chemsky

Aromaticity index has been proposed in "A new aromaticity index and its application to five-membered ring heterocycles" Tetrahedron doi.org/10.1016/S004...

Check #alvaDesc at: alvascience.com/alvadesc/
Key features:
✅ Consensus modeling (ICP) improved predictivity
✅ Key features: electronegativity, lipophilicity, pyrroles, tertiary amines
✅ Descriptors from #alvaDesc www.alvascience.com/alvadesc/

#QSTR #toxicity #insilico #cheminformatics #3Rs
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doi.org
New study in Chemosphere: QSTR models predict rat oral LD50 for 702 pharmaceuticals, offering an in silico alternative to animal testing (OECD guidelines).

🔗 doi.org/10.1016/j.ch...
#descriptoroftheday #moleculardescriptors #qsar #cheminformatics #alvatips #chemsky

Harmonic Oscillator Model of Aromaticity index has been proposed in "Separation of the energetic and geometric..." via
@pubs.acs.org
doi.org/10.1021/ci96...

Check #alvaDesc at: alvascience.com/alvadesc/
With its intuitive interface, alvaBuilder enables de novo molecular design from your own training set, helping you explore chemical space efficiently and creatively.
In this short tutorial, we show how to easily perform scaffold decoration in just a few steps, generating novel molecular structures with desired properties.
🎥 Short video tutorial - Scaffold Decoration with alvaBuilder

Watch now on YouTube → www.youtube.com/watch?v=Duu1...

Discover how alvaBuilder can be used to design new molecules starting from your favorite scaffold.
alvaBuilder - Scaffold decoration
YouTube video by Alvascience
www.youtube.com
🚀 New J. Med. Chem. study: Linker methylation boosts oral bioavailability of VHL-PROTACs.
📊 #alvaDesc linked chemical space to PK for smarter design in #bRo5.

📄 Read the paper: doi.org/10.1021/acs....
🔗 Check alvaDesc at: alvascience.com/alvadesc/

#DrugDiscovery #PROTAC #ADME #chemsky
#descriptoroftheday #moleculardescriptors #qsar #cheminformatics #alvatips #chemsky

Length-to-breadth ratio by WHIM has been described in Todeschini, R., & Consonni, V. (2000). Handbook of Molecular Descriptors. doi.org/10.1002/9783...

Check #alvaDesc at: alvascience.com/alvadesc/
#descriptoroftheday #moleculardescriptors #qsar #cheminformatics #alvatips #chemsky

Asphericity index has been described in Todeschini, R., & Consonni, V. (2000). Handbook of Molecular Descriptors. Weinheim, Germany doi.org/10.1002/9783...

Check #alvaDesc at: alvascience.com/alvadesc/
🌍 New in Science of The Total Environment @elsevierconnect.bsky.social:
Kar, Amin & Li (2025) used QSAR, q-RASAR & ML to model pesticide toxicity in rainbow trout.
🔑 2000+ pesticides
🔑 Strong predictive models
🔑 Descriptors from #alvaDesc

🔗 alvascience.com/alvadesc/
📄 doi.org/10.1016/j.sc...

#QSAR
#descriptoroftheday #moleculardescriptors #qsar #cheminformatics #alvatips #chemsky

Molecular eccentricity has been proposed in Arteca, G. A. (2007). Molecular Shape Descriptors. In Reviews in Computational Chemistry doi.org/10.1002/9780...

Check #alvaDesc at: alvascience.com/alvadesc/
📄 Polymers: Ascencio-Medina et al. (2024) built #QSPR models to predict polymer dielectric constants.

🔑 1,273 descriptors from #alvaDesc, reduced via GA → GBR models outperformed linear methods (R² ~0.94 train, ~0.82 test)

📄 doi.org/10.3390/poly...
🔗 alvascience.com/alvaDesc/

#chemsky
#descriptoroftheday #moleculardescriptors #qsar #cheminformatics #alvatips #chemsky

3D Petitjean shape index has been proposed in "Applications of the Radius-Diameter Diagram to the Classification of..." via
@pubs.acs.org doi.org/10.1021/ci00...

Check #alvaDesc at: alvascience.com/alvadesc/