Barbara Zdrazil
@bzdrazil.bsky.social
organising drug discovery data @ChEMBL, editor @jcheminf, loves sciene, yoga, writing, running, nature. mother of three. she/her
Check out our new paper available as preprint: chemrxiv.org/engage/chemr...
Enhancing Bioassay Annotations in ChEMBL with Artificial Intelligence
As the volume and diversity of bioactivity data in ChEMBL continues to grow, ensuring that assay metadata is standardized, interoperable, and machine-readable is critical for effective use in cheminfo...
chemrxiv.org
September 18, 2025 at 10:26 AM
Check out our new paper available as preprint: chemrxiv.org/engage/chemr...
Journal of Cheminformatics just launched a new special collection on "Evaluating AI and machine learning models in cheminformatics: benchmarking techniques and case studies" guested-edited by G. Colmenarejo, S. Lobentanzer & O. Méndez-Lucio www.biomedcentral.com/collections/...
Evaluating AI and machine learning models in cheminformatics: benchmarking techniques and case studies
www.biomedcentral.com
May 28, 2025 at 7:31 AM
Journal of Cheminformatics just launched a new special collection on "Evaluating AI and machine learning models in cheminformatics: benchmarking techniques and case studies" guested-edited by G. Colmenarejo, S. Lobentanzer & O. Méndez-Lucio www.biomedcentral.com/collections/...
It’s a rainy day. Just loving the humor of my colleagues @ebi.embl.org
May 27, 2025 at 12:33 PM
It’s a rainy day. Just loving the humor of my colleagues @ebi.embl.org
In this review we are thoroughly discussing pros&cons and applications of different NLP/ AI methods for drug discovery….hoping it’s of use!
Out now!
An Open Targets team reviewed the use of Natural Language Processing in drug discovery, exploring Named Entity Recognition, Knowledge Graphs, Large Language Models, and the strengths and weaknesses of different methods for NLP tasks
🧬🖥️
www.tandfonline.com/doi/full/10....
An Open Targets team reviewed the use of Natural Language Processing in drug discovery, exploring Named Entity Recognition, Knowledge Graphs, Large Language Models, and the strengths and weaknesses of different methods for NLP tasks
🧬🖥️
www.tandfonline.com/doi/full/10....
Natural language processing in drug discovery: bridging the gap between text and therapeutics with artificial intelligence
The field of Natural Language Processing (NLP) within the life sciences has exploded in its capacity to aid the extraction and analysis of data from scientific texts in recent years through the adv...
www.tandfonline.com
May 1, 2025 at 10:08 PM
In this review we are thoroughly discussing pros&cons and applications of different NLP/ AI methods for drug discovery….hoping it’s of use!
Great work by my fantastic collaborator @slobentanzer.bsky.social and team!
Applying LLMs to biomedical research today can go one of two ways: we either use a closed-source web app, or we get coding ourselves. Many researchers lack training for the latter, so their only choice is the former. We want to change that. www.nature.com/articles/s41...
February 5, 2025 at 3:02 PM
Great work by my fantastic collaborator @slobentanzer.bsky.social and team!
Reposted by Barbara Zdrazil
The ChEMBL web interface now also displays cross links to Alpha Fold Database. Here is an example: www.ebi.ac.uk/chembl/explo...
Target: Receptor tyrosine-protein kinase erbB-2 (CHEMBL2311234)
Report card for Target Receptor tyrosine-protein kinase erbB-2 (CHEMBL2311234). Mus musculus, SINGLE PROTEIN, 2.7.10.1, CD_antigen=CD340, Erbb2, Kiaa3023, Neu, ...
www.ebi.ac.uk
January 14, 2025 at 2:27 PM
The ChEMBL web interface now also displays cross links to Alpha Fold Database. Here is an example: www.ebi.ac.uk/chembl/explo...
Some impressions from yesterday’s morning run on Campus.
January 11, 2025 at 7:35 AM
Some impressions from yesterday’s morning run on Campus.
From now on you can also follow the teams' efforts on BlueSky.....
The ChEMBL group is now posting on Bluesky!
January 10, 2025 at 11:03 AM
From now on you can also follow the teams' efforts on BlueSky.....
Still exciting to submit a paper :)
I wonder if that is a sign that this is still the right profession for me?
I wonder if that is a sign that this is still the right profession for me?
November 28, 2024 at 10:09 AM
Still exciting to submit a paper :)
I wonder if that is a sign that this is still the right profession for me?
I wonder if that is a sign that this is still the right profession for me?
Hey; this is my first post on bluesky as I am moving away from X. Hope it will work for me as the good old days of Twitter are long gone.
November 23, 2024 at 7:39 AM
Hey; this is my first post on bluesky as I am moving away from X. Hope it will work for me as the good old days of Twitter are long gone.