Computational and Structural Biotechnology Journal (CSBJ)
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Computational and Structural Biotechnology Journal (CSBJ)
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Computational and Structural Biotechnology Journal (CSBJ) is an online open-access journal and is composed of four specialty sections: • General • Smart Hospital • Nanoscience & Advanced Materials • Quantum Biology & Biophotonics

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🔗 Temporal complexity of LVV-hemorphin-7 allosterism at the angiotensin II type 1 receptor assessed using entropy-based approaches. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#StructuralBiology #Biophysics #GPCR #Entropy #Pharmacology
Temporal complexity of LVV-hemorphin-7 allosterism at the angiotensin II type 1 receptor assessed using entropy-based approaches. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.10.024
November 30, 2025 at 9:19 PM
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🔗 Advancing automated cell type annotation with large language models and single-cell isoform sequencing. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#LargeLanguageModels #Genomics #CellBiology #AlternativeSplicing #LLMs #SystemsBiology
Advancing automated cell type annotation with large language models and single-cell isoform sequencing. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.11.008
November 21, 2025 at 9:54 PM
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🔗 Cell-type specific single-cell signatures reveal nephrotoxic drug effects. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#Nephrotoxicity #CellBiology #Cheminformatics #AcuteKidneyInjury #DrugDiscovery #SingleCellGenomics #DrugDevelopment
Cell-type specific single-cell signatures reveal nephrotoxic drug effects. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.11.012
November 21, 2025 at 9:11 PM
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🔗 A statistical-physics approach for codon usage optimisation. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#Genomics #CodonOptimization #SyntheticBiology #GeneticEngineering #SystemsBiology #GeneDesign #MolecularBiology
A statistical-physics approach for codon usage optimisation. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.07.020
November 20, 2025 at 9:05 PM
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🔗 Long-range transcription factor binding sites clustered regions may mediate transcriptional regulation through phase-separation interactions in early human embryo. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚CSBJ: www.csbj.org

#DevelopmentalBiology #Genomics
Long-range transcription factor binding sites clustered regions may mediate transcriptional regulation through phase-separation interactions in early human embryo. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.09.017
November 20, 2025 at 7:43 PM
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🧬 What new possibilities emerge when Large Language Models (LLMs) meet large-scale omics data?

🔗 Large language models and their applications in bioinformatics. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚CSBJ: www.csbj.org

#Omics #ArtificialIntelligence #LLM
Large language models and their applications in bioinformatics. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.09.031
November 20, 2025 at 7:02 PM
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🔗Protein allosteric site identification using machine learning and per amino acid residue reported internal protein nanoenvironment descriptors. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚CSBJ: www.csbj.org

#ComputationalBiology #StructuralBiology #Biophysics
Protein allosteric site identification using machine learning and per amino acid residue reported internal protein nanoenvironment descriptors. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.10.036
November 20, 2025 at 12:52 AM
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🔗 Biased activation of the vasopressin V2 receptor probed by molecular dynamics simulations, NMR and pharmacological studies. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#GPCR #StructuralBiology #MolecularDynamics #Pharmacology #Biophysics
Biased activation of the vasopressin V2 receptor probed by molecular dynamics simulations, NMR and pharmacological studies. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.10.039
November 20, 2025 at 12:00 AM
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🔗 Multiscale molecular modeling of chromatin with MultiMM: From nucleosomes to the whole genome. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#Chromatin #ComputationalBiology #Genomics #MolecularModeling #Biophysics #StructuralBiology
Multiscale molecular modeling of chromatin with MultiMM: From nucleosomes to the whole genome. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.09.025
November 17, 2025 at 7:05 PM
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🔗 Molecular dynamics simulations unveil the aggregation patterns and salting out of polyarginines at zwitterionic POPC bilayers in solutions of various ionic strengths. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚CSBJ: www.csbj.org

#MembraneProtein #Biophysics
Molecular dynamics simulations unveil the aggregation patterns and salting out of polyarginines at zwitterionic POPC bilayers in solutions of various ionic strengths. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.11.004
November 17, 2025 at 6:04 PM
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🔗 Conformational plasticity links structural instability of NAA10F128I and NAA10F128L mutants to their catalytic deregulation. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#Biophysics #Enzymology #StructuralBiology #Mutations #ProteinFolding
Conformational plasticity links structural instability of NAA10F128I and NAA10F128L mutants to their catalytic deregulation. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.11.014
November 16, 2025 at 7:48 PM
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🔗 RNA-protein interaction prediction without high-throughput data: An overview and benchmark of in silico tools. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#RNA #ProteinInteraction #Genomics #Proteomics #Bioinformatics
RNA-protein interaction prediction without high-throughput data: An overview and benchmark of in silico tools. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.11.015
November 16, 2025 at 6:54 PM
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🔗Impact of water models on the structure and dynamics of enzyme tunnels. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚CSBJ: www.csbj.org

#ComputationalBiology #MolecularDynamics #Enzymology #StructuralBiology #ProteinEngineering #Biophysics #MolecularSimulation
Impact of water models on the structure and dynamics of enzyme tunnels. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2024.10.051
November 16, 2025 at 2:55 PM
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🔗 Evolutionary and structural bioinformatics identifies GPR89 as a conserved member of the LIMR protein superfamily. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#StructuralBiology #ComputationalBiology #Evolution #ProteinScience #AlphaFold
Evolutionary and structural bioinformatics identifies GPR89 as a conserved member of the LIMR protein superfamily. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.11.003
November 16, 2025 at 1:47 PM
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🔗 Radiomic clustering using graph network techniques coupled with unbalanced optimal transport. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#Radiomics #MedicalImaging #CancerResearch #PrecisionOncology #Radiogenomics #DigitalHealth
Radiomic clustering using graph network techniques coupled with unbalanced optimal transport. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.10.066
November 16, 2025 at 11:13 AM
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🔗 In silico investigations of albumin-GLP-1 receptor agonist complexes for diabetes drug delivery applications. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#MolecularDynamics #DiabetesResearch #Biotherapeutics #DrugDelivery #Biophysics
In silico investigations of albumin-GLP-1 receptor agonist complexes for diabetes drug delivery applications. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.11.007
November 16, 2025 at 10:23 AM
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🔗 Does isovaleric acid play a key role in the interaction between probiotics and antidepressants? A secondary analysis of a randomized clinical trial. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#GutBrainAxis #MentalHealth #Probiotics
Does isovaleric acid play a key role in the interaction between probiotics and antidepressants? A secondary analysis of a randomized clinical trial. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.05.035
November 13, 2025 at 9:18 PM
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🔗 Transformers in RNA structure prediction: A review. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#RNA #Bioinformatics #ComputationalBiology #MachineLearning #StructuralBiology #AI #DeepLearning #Biophysics #Genomics
Transformers in RNA structure prediction: A review. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.03.021
November 13, 2025 at 1:53 PM
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🔗 Coordinated subdomain movements of MlaC regulate ligand binding and transport. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#Microbiology #AntibioticResistance #MembraneBiology #StructuralBiology #ComputationalBiology #Biophysics
Coordinated subdomain movements of MlaC regulate ligand binding and transport. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.05.031
November 13, 2025 at 1:27 PM
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🔗 Nucleotide asymmetry and flexible linker dynamics modulate drug efflux cycle of P-glycoprotein, A computational study. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#DrugResistance #StructuralBiology #ProteinDynamics #Biophysics #Pgp #ABCB1
Nucleotide asymmetry and flexible linker dynamics modulate drug efflux cycle of P-glycoprotein, A computational study. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.10.064
November 13, 2025 at 12:38 PM
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🔗 Improving prediction accuracy in chimeric proteins with windowed multiple sequence alignment. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#StructuralBiology #Biophysics #Bioinformatics #ProteinStructurePrediction #AlphaFold
Improving prediction accuracy in chimeric proteins with windowed multiple sequence alignment. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.07.039
November 12, 2025 at 7:04 PM
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🔗 A method for analyzing the ERP associated with high frequency ANT DBS offset. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ Smart Hospital: www.csbj.org/smarthospital

#Neuroscience #EEG #BrainMapping #DeepBrainStimulation #Neuroengineering #LimbicSystem
A method for analyzing the ERP associated with high frequency ANT DBS offset. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.09.042
November 12, 2025 at 6:02 PM
csbj.org
🔗 The potential of Real-Time rendered-volume 3D Imaging in immersive virtual-reality (VR) for surgical planning in infants with congenital thoracic malformation (CTM). Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ Smart Hospital: www.csbj.org/smarthospital
The potential of Real-Time rendered-volume 3D Imaging in immersive virtual-reality (VR) for surgical planning in infants with congenital thoracic malformation (CTM). Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.11.005
November 12, 2025 at 4:52 PM
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🔗 Advances in the structure-based design of protein vaccines for respiratory infectious diseases. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ Nanoscience and Advanced Materials: www.csbj.org/nano

#StructuralBiology #Vaccines #Immunology #Vaccinology
Advances in the structure-based design of protein vaccines for respiratory infectious diseases. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.10.008
November 11, 2025 at 5:17 PM
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⚡️ How does the Hv1 proton channel conduct protons faster than diffusion should allow?

🔗 Fluctuating hydrogen-bond network of the Hv1 ion channel. Computational and Structural Biotechnology Journal, DOI: doi.org/10.1016/j.cs...

📚 CSBJ: www.csbj.org

#Biophysics #MolecularDynamics #StructuralBiology
Fluctuating hydrogen-bond network of the Hv1 ion channel. Computational and Structural Biotechnology Journal, DOI: https://doi.org/10.1016/j.csbj.2025.10.021
November 10, 2025 at 1:38 PM