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genolabgem.bsky.social
LABGeM
@genolabgem.bsky.social
Bioinformatics team in microbial genomics and metabolism at Genoscope. Developer of the MicroScope platform (http://mage.genoscope.cns.fr/microscope)

labgem.genoscope.cns.fr

Evry, France
📢 Job opening — Bioinformatics Engineer
Join the MicroScope platform (LABGeM, CEA/Genoscope) to develop tools and pipelines for microbial genomics.

📍 Evry, France | ⏳ Fixed-term contract
🔗 bit.ly/3Z5WSXc

@ifb-elixir-fr.bsky.social
Ingénieur en bioinformatique pour le développement de la plateforme MicroScope - LABGeM
Localisé au CEA/Genoscope, un centre de recherche scientifique dédié à la génomique environnementale, le Laboratoire d’Analyses Bioinformatiques pour la Génomique et le Métabolisme (LABGeM, UMR8030, l...
bit.ly
January 12, 2026 at 11:36 AM
📢 Hiring: Bioinformatics Engineer position funded by the ANR PanGAIMiX, for the development of new methods in the PPanGGOLiN software suite.

💻 Build cool tools for #pangenomics
🔬 computer science × biology

📍 Evry, France | ⏳ Fixed-term contract
👉 Interested? Contact us
🔗 bit.ly/3NfSP8o
Engineer for the development of new methods in pangenomics - LABGeM
Prokaryotes —bacteria and archaea— are diverse, ubiquitous organisms with vast impacts on health, soil, and ocean ecosystems. Large-scale genome sequencing and pangenomics have revealed their molecula...
bit.ly
January 12, 2026 at 11:27 AM
🚀 New preprint out!
We are happy to introduce PANORAMA, a new bioinformatics tool for comparative pangenomics, designed to predict and compare biological systems across prokaryotic pangenomes.

It has been developed by @jpjarnoux.bsky.social

📄 Preprint: doi.org/10.64898/202...
Panorama: a robust pangenome-based method for predicting and comparing biological systems across species
Over the last decade, the expansion in the number of available genomes has profoundly transformed the study of genetic diversity, evolution, and ecological adaptation in prokaryotes. However, traditio...
doi.org
January 5, 2026 at 2:54 PM
Our PhD student Clémence Lauden is presenting her poster on Metapangenomic analysis within the Thermococcales at #Pangenome25 conference in Valencia🧬🌐

If you’re attending , don’t miss the chance to stop by, ask questions, and chat about the project.

See you there! 👋🎓
#pangenome #archaea
December 3, 2025 at 11:23 PM
@tlemane.bsky.social presented PanGBank at #Pangenome25 conference in Valencia 🧬🌐

We’re thrilled to share this resource with the community and to see the growing interest in #pangenomics
December 3, 2025 at 11:13 PM
We’ve just released a set of Google Colab tutorials to help you get started with PanGBank. 🧬💻
github.com/labgem/PanGB...

Whether you're new to the resource or looking to dig deeper, these step-by-step notebooks make it easy to jump in.

🔗 Try them out and tell us what you think!
#pangenomics
December 3, 2025 at 11:05 PM
We’re excited to announce the launch of the beta version of PanGBank website! 🧬🌐
pangbank.genoscope.cns.fr

PanGBank is a web-based platform for exploring, analyzing, and downloading pangenomes created with #PPanGGOLiN.

🔗 Dive in, test it out, and let us know what you think!

#pangenome
Home
pangbank.genoscope.cns.fr
December 3, 2025 at 10:49 PM
@genolabgem.bsky.social was there with @j-main-guy.bsky.social and @tlemane.bsky.social presenting the PanGBank database and new developments in metapangenomics #pangenome #PPanGGOLiN
🧬 🔎 Ce 17 novembre a eu lieu la journée du consortium ABRomics à l’Institut Pasteur. L’occasion de présenter aux différents représentants de nos parties prenantes l’avancement du projet et les développements en cours !
December 3, 2025 at 10:28 PM
🚀 We’re looking for a Master’s student to join the PanGAIMiX project to develop workflows for pangenome graph functional annotation at large scale
💻 Build cool tools for big genomic data
🔬 computer science × biology
📍 Evry | 📅 january 2026 | ⏳ 6 months

👉 Interested? Contact us
bit.ly/4mMLLfp
October 2, 2025 at 12:22 PM
A new opportunity to join the team !
September 5, 2025 at 2:55 PM
Come work with us !
📢🚨Recrutement d’un·e Ingénieur-e en développement logiciel !
📍 Évry (91) / 💼 CDI @cea.fr
🔎 www.linkedin.com/feed/update/...
#Recrutement #Ingénieur #Dev #Bioinformatique #OffreEmploi #Data #Mudis
June 17, 2025 at 2:03 PM
We're on the lookout for a talented Software Development Engineer to join our team permanently at CEA and work on the MicroScope platform! 🚀💻 If you're passionate about software development and ready for a new challenge, we'd love to hear from you.
@genoscopeumr.bsky.social@cea.fr
June 12, 2025 at 6:44 AM
Thrilled to announce the successful defense of the Habilitation à Diriger des Recherches (HDR) by Violette Da Cunha! 🎉📚 Congratulations on this well-deserved achievement!
#AcademicLife #Archaea
@genoscopeumr.bsky.social@univparissaclay.bsky.social @univevry.bsky.social
June 12, 2025 at 6:41 AM
Congratulations to @jpjarnoux.bsky.social who just achieved a major milestone by successfully defending his thesis! 🎓✨ Welcome to the world of doctors!
#AcademicLife #ProudPI #pangenomics
@genoscopeumr.bsky.social@univparissaclay.bsky.social @cea.fr @univevry.bsky.social
June 12, 2025 at 6:39 AM
We've been keeping a low profile for a while, but we've got lots of good news...
June 12, 2025 at 6:37 AM
We're offering a fully funded PhD to work on new methods for microbial #pangenomics using #LLM in collaboration with @guigau.bsky.social and Christophe Ambroise.
labgem.genoscope.cns.fr/2025/03/17/f...

Apply before April 27th.

@genoscopeumr.bsky.social @cea-paris-saclay.bsky.social
March 17, 2025 at 5:50 PM
Reposted by LABGeM
PPanGGOLiN is now available on Galaxy!

usegalaxy.fr/root?tool_id...

A huge thanks to Thomas Lacroix, Romane Libouban and @bebatut.bsky.social
Galaxy
Galaxy is a community-driven web-based analysis platform for life science research.
usegalaxy.fr
February 12, 2025 at 2:57 PM
MicroScope training in sunny Montpellier in Christmas mode
December 4, 2024 at 12:41 PM