Cameron Thrash
@jcamthrash.bsky.social
Professor, USC Marine and Environmental Biology, microbe hunter. he/him. Not a bot. thethrashlab.com
Unveiling the landscape of prokaryotic global regulators through deep protein language models journals.asm.org/doi/full/10.... #jcampubs
November 25, 2025 at 2:04 PM
Unveiling the landscape of prokaryotic global regulators through deep protein language models journals.asm.org/doi/full/10.... #jcampubs
Transcriptomic and Proteomic Analysis Reveals Nitrogen Recycling as a Core Mechanism for Prochlorococcus Prolonged Survival www.biorxiv.org/content/10.1... #jcampubs
November 25, 2025 at 1:56 PM
Transcriptomic and Proteomic Analysis Reveals Nitrogen Recycling as a Core Mechanism for Prochlorococcus Prolonged Survival www.biorxiv.org/content/10.1... #jcampubs
A geothermal amoeba sets a new upper temperature limit for eukaryotes www.biorxiv.org/content/10.1... #jcampubs
November 25, 2025 at 1:54 PM
A geothermal amoeba sets a new upper temperature limit for eukaryotes www.biorxiv.org/content/10.1... #jcampubs
Flavobacteria buffer nitrous oxide emissions from partial denitrifiers in coastal sediments www.biorxiv.org/content/10.1... #jcampubs
November 25, 2025 at 1:52 PM
Flavobacteria buffer nitrous oxide emissions from partial denitrifiers in coastal sediments www.biorxiv.org/content/10.1... #jcampubs
Global distribution, genesis, and enrichment characteristics of high-concentration natural hydrogen www.frontiersin.org/journals/mar... #jcampubs
November 25, 2025 at 1:49 PM
Global distribution, genesis, and enrichment characteristics of high-concentration natural hydrogen www.frontiersin.org/journals/mar... #jcampubs
Spatial distribution of rare and common phytoplankton taxa is controlled by geospatial and physicochemical variables esajournals.onlinelibrary.wiley.com/doi/10.1002/... #jcampubs
November 25, 2025 at 1:48 PM
Spatial distribution of rare and common phytoplankton taxa is controlled by geospatial and physicochemical variables esajournals.onlinelibrary.wiley.com/doi/10.1002/... #jcampubs
Current methods overestimate coastal blue carbon potential aslopubs.onlinelibrary.wiley.com/doi/10.1002/... #jcampubs
November 25, 2025 at 1:46 PM
Current methods overestimate coastal blue carbon potential aslopubs.onlinelibrary.wiley.com/doi/10.1002/... #jcampubs
ASVNet: Inferring microbes from 16S rRNA amplicon sequencing data www.biorxiv.org/content/10.1... #jcampubs
November 24, 2025 at 3:09 PM
ASVNet: Inferring microbes from 16S rRNA amplicon sequencing data www.biorxiv.org/content/10.1... #jcampubs
Ecological distribution, environmental roles and drivers of Actinobacteriota in two Mid-Atlantic estuaries www.biorxiv.org/content/10.1... #jcampubs
November 24, 2025 at 3:08 PM
Ecological distribution, environmental roles and drivers of Actinobacteriota in two Mid-Atlantic estuaries www.biorxiv.org/content/10.1... #jcampubs
Microbial metabolism of complex organic matter across diverse deep-sea ecosystems www.biorxiv.org/content/10.1... #jcampubs
November 24, 2025 at 3:05 PM
Microbial metabolism of complex organic matter across diverse deep-sea ecosystems www.biorxiv.org/content/10.1... #jcampubs
Isolation of the first cultured representative from a deep-branching phylum in serpentinite-hosted ecosystems www.biorxiv.org/content/10.1... #jcampubs
November 24, 2025 at 2:57 PM
Isolation of the first cultured representative from a deep-branching phylum in serpentinite-hosted ecosystems www.biorxiv.org/content/10.1... #jcampubs
Aerobic methane production in marine ecosystems aslopubs.onlinelibrary.wiley.com/doi/10.1002/... #jcampubs 🌊
November 24, 2025 at 2:56 PM
Aerobic methane production in marine ecosystems aslopubs.onlinelibrary.wiley.com/doi/10.1002/... #jcampubs 🌊
Models and co-culture experiments assess four mechanisms of phytoplankton–bacteria interactions www.nature.com/articles/s41... #jcampubs
Models and co-culture experiments assess four mechanisms of phytoplankton–bacteria interactions - Nature Microbiology
Mathematical representations of overflow metabolism, mixotrophy, exoenzymes and reactive oxygen species detoxification recapitulate dynamics in co-cultures of Prochlorococcus and eight heterotrophic b...
www.nature.com
November 24, 2025 at 2:52 PM
Models and co-culture experiments assess four mechanisms of phytoplankton–bacteria interactions www.nature.com/articles/s41... #jcampubs
Distribution of methane-cycling archaea in buried ridge flank sediment: community zonation, activity, and potential environmental drivers www.frontiersin.org/journals/mic... #jcampubs
November 24, 2025 at 2:52 PM
Distribution of methane-cycling archaea in buried ridge flank sediment: community zonation, activity, and potential environmental drivers www.frontiersin.org/journals/mic... #jcampubs
Vertically Resolved Plankton Metabolism From Autonomous Measurements in the Oligotrophic Ocean agupubs.onlinelibrary.wiley.com/doi/10.1029/... #jcampubs 🌊
November 24, 2025 at 2:51 PM
Vertically Resolved Plankton Metabolism From Autonomous Measurements in the Oligotrophic Ocean agupubs.onlinelibrary.wiley.com/doi/10.1029/... #jcampubs 🌊
Carbon metabolic versatility underpins Bathyarchaeia ecological significance across the global deep subsurface academic.oup.com/ismej/advanc... #jcampubs
Carbon metabolic versatility underpins Bathyarchaeia ecological significance across the global deep subsurface
Abstract. Bathyarchaeia, among the most ancient and abundant microbial lineages on Earth, dominate diverse anoxic subsurface ecosystems and play a pivotal
academic.oup.com
November 24, 2025 at 2:49 PM
Carbon metabolic versatility underpins Bathyarchaeia ecological significance across the global deep subsurface academic.oup.com/ismej/advanc... #jcampubs
Light-driven diel oscillations in microbial metabolism underpin estuarine biogeochemical resilience academic.oup.com/ismecommun/a... #jcampubs
November 24, 2025 at 2:48 PM
Light-driven diel oscillations in microbial metabolism underpin estuarine biogeochemical resilience academic.oup.com/ismecommun/a... #jcampubs
Calculating fast differential genome coverages among metagenomic sources using micov www.nature.com/articles/s42... #jcampubs
Calculating fast differential genome coverages among metagenomic sources using micov - Communications Biology
micov computes coverage breadth across genomes and samples. Its application in metagenomics highlights strain heterogeneity, uncovers associations linking genetic elements to phenotypic traits, and ai...
www.nature.com
November 21, 2025 at 4:22 PM
Calculating fast differential genome coverages among metagenomic sources using micov www.nature.com/articles/s42... #jcampubs
An archaeal genetic code with all TAG codons as pyrrolysine www.science.org/doi/abs/10.1... #jcampubs
An archaeal genetic code with all TAG codons as pyrrolysine
Multiple genetic codes developed during the evolution of eukaryotes and bacteria, yet no alternative genetic code is known for archaea. We used proteomics to confirm our prediction that certain archae...
www.science.org
November 21, 2025 at 4:20 PM
An archaeal genetic code with all TAG codons as pyrrolysine www.science.org/doi/abs/10.1... #jcampubs
Updated taxonomy of the family Rhizobiaceae with proposals for 10 novel genera and 35 novel combinations www.biorxiv.org/content/10.1... #jcampubs
November 21, 2025 at 4:17 PM
Updated taxonomy of the family Rhizobiaceae with proposals for 10 novel genera and 35 novel combinations www.biorxiv.org/content/10.1... #jcampubs
Rubisco is slow across the tree of life www.pnas.org/doi/abs/10.1... #jcampubs
Rubisco is slow across the tree of life | PNAS
Rubisco is the main gateway through which inorganic carbon enters the biosphere, catalyzing
the vast majority of carbon fixation on Earth. This piv...
www.pnas.org
November 21, 2025 at 3:56 PM
Rubisco is slow across the tree of life www.pnas.org/doi/abs/10.1... #jcampubs
Organic geochemical evidence for life in Archean rocks identified by pyrolysis–GC–MS and supervised machine learning www.pnas.org/doi/abs/10.1... #jcampubs
November 21, 2025 at 3:55 PM
Organic geochemical evidence for life in Archean rocks identified by pyrolysis–GC–MS and supervised machine learning www.pnas.org/doi/abs/10.1... #jcampubs
Controls and contributions of methylotrophic methanogenesis to methane production in coastal sediments aslopubs.onlinelibrary.wiley.com/doi/10.1002/... #jcampubs
November 21, 2025 at 3:55 PM
Controls and contributions of methylotrophic methanogenesis to methane production in coastal sediments aslopubs.onlinelibrary.wiley.com/doi/10.1002/... #jcampubs
Beyond Methane Oxidation: The Protein Landscape of ANME‐2a Reveals an Integrated System for Diazotrophy and Membrane Fortification enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs
November 21, 2025 at 3:54 PM
Beyond Methane Oxidation: The Protein Landscape of ANME‐2a Reveals an Integrated System for Diazotrophy and Membrane Fortification enviromicro-journals.onlinelibrary.wiley.com/doi/10.1111/... #jcampubs
Genome integrity relies on rapid recycling of DNA Pol III in bacteria www.pnas.org/doi/abs/10.1... #jcampubs
November 21, 2025 at 3:52 PM
Genome integrity relies on rapid recycling of DNA Pol III in bacteria www.pnas.org/doi/abs/10.1... #jcampubs