Dr Andrew Lonsdale
@lonsbio.bsky.social
Bioinformatics post-doc at @petermaccc.bsky.social in the @aliciao.bsky.social Lab. Keen believer in the benefit of side projects. He/Him. Work/Life: ๐ป๐ป๐ป๐ป๐ป ๐จโ๐ฉโ๐งโ๐ง ๐จโ๐ฉโ๐งโ๐ง
My probably wrong 2c is that I once spent a long time in a similar situation to learn that .yaml and .yml were treated very differently by the program I was using, and to check the filenames or extensions between working and non-working aren't the issue in some weird way
January 19, 2026 at 12:35 PM
My probably wrong 2c is that I once spent a long time in a similar situation to learn that .yaml and .yml were treated very differently by the program I was using, and to check the filenames or extensions between working and non-working aren't the issue in some weird way
Sounds like a version of "Spot It!"? math.mit.edu/research/hig...
math.mit.edu
January 19, 2026 at 12:31 PM
Sounds like a version of "Spot It!"? math.mit.edu/research/hig...
Reposted by Dr Andrew Lonsdale
New blog post! nf-core and AI
https://nf-co.re/blog/2026/statement-on-ai/
https://nf-co.re/blog/2026/statement-on-ai/
January 14, 2026 at 10:02 AM
New blog post! nf-core and AI
https://nf-co.re/blog/2026/statement-on-ai/
https://nf-co.re/blog/2026/statement-on-ai/
Reposted by Dr Andrew Lonsdale
Glad to see impact, significance, design as evaluation criteria. I once had a submission rejected from JOSS because my software had too few lines of code (still a little salty about that one). Good move all around ๐ blog.joss.theoj.org/2026/01/prep...
Preparing JOSS for a generative AI future: From code to human creativity and design | Journal of Open Source Software Blog
Blog for the Journal of Open Source Software โข <a href='https://joss.theoj.org'>https://joss.theoj.org</a>
blog.joss.theoj.org
January 11, 2026 at 10:09 PM
Glad to see impact, significance, design as evaluation criteria. I once had a submission rejected from JOSS because my software had too few lines of code (still a little salty about that one). Good move all around ๐ blog.joss.theoj.org/2026/01/prep...
Every guide to GenAI in research ends up being:
And now that you know how it's doneโฆโฆ.
Don't do it.
And now that you know how it's doneโฆโฆ.
Don't do it.
December 18, 2025 at 9:26 PM
Every guide to GenAI in research ends up being:
And now that you know how it's doneโฆโฆ.
Don't do it.
And now that you know how it's doneโฆโฆ.
Don't do it.
Reposted by Dr Andrew Lonsdale
๐ฃ Save The Date for Cancer Bioinformatics Australia 2026! ๐ฃ
CBA will be back in 2026 on June 5th, this time in Brisbane!
It will feature oral and poster presentations, networking opportunities, and high-profile invited national and international speakers. Further info: cancerbioinformatics.au
CBA will be back in 2026 on June 5th, this time in Brisbane!
It will feature oral and poster presentations, networking opportunities, and high-profile invited national and international speakers. Further info: cancerbioinformatics.au
December 18, 2025 at 5:19 AM
๐ฃ Save The Date for Cancer Bioinformatics Australia 2026! ๐ฃ
CBA will be back in 2026 on June 5th, this time in Brisbane!
It will feature oral and poster presentations, networking opportunities, and high-profile invited national and international speakers. Further info: cancerbioinformatics.au
CBA will be back in 2026 on June 5th, this time in Brisbane!
It will feature oral and poster presentations, networking opportunities, and high-profile invited national and international speakers. Further info: cancerbioinformatics.au
Reposted by Dr Andrew Lonsdale
Thatโs a wrap! Huge thank you to everyone who joined us for #ABACBS2025 & a big shout-out to the Adelaide bioinfo community who worked their butts off. Couldnโt have asked for a better crew or a better venue than Adelaide Oval. @wessidepraxis.bsky.social @linsalrob.bsky.social
November 28, 2025 at 5:58 AM
Thatโs a wrap! Huge thank you to everyone who joined us for #ABACBS2025 & a big shout-out to the Adelaide bioinfo community who worked their butts off. Couldnโt have asked for a better crew or a better venue than Adelaide Oval. @wessidepraxis.bsky.social @linsalrob.bsky.social
I enjoyed making this with you all much more than this photo would imply - I did not know we were linking arms! #wasmodic #abacbs2025
November 28, 2025 at 3:03 AM
I enjoyed making this with you all much more than this photo would imply - I did not know we were linking arms! #wasmodic #abacbs2025
Reposted by Dr Andrew Lonsdale
It's not just because @torstenseemann.bsky.social is a bioinformatics legend but this may be my favourite #abacbs2025 poster because I'm a #trek tragic ๐
November 26, 2025 at 12:34 AM
It's not just because @torstenseemann.bsky.social is a bioinformatics legend but this may be my favourite #abacbs2025 poster because I'm a #trek tragic ๐
Reposted by Dr Andrew Lonsdale
Thanks to the amazing Adelaide Bioinformatics community for making #ABACBS2025 an amazing event. We couldnโt have done it without you. A few more days of workshops to go before the festival finishes for another year ๐
November 26, 2025 at 10:02 AM
Thanks to the amazing Adelaide Bioinformatics community for making #ABACBS2025 an amazing event. We couldnโt have done it without you. A few more days of workshops to go before the festival finishes for another year ๐
Reposted by Dr Andrew Lonsdale
Awesome talk by @jovmaksimovic.bsky.social one detecting fusions in single cells with probes designed for 10X Flex. If I do say so myself ๐ #ABACBS2025
November 25, 2025 at 6:52 AM
Awesome talk by @jovmaksimovic.bsky.social one detecting fusions in single cells with probes designed for 10X Flex. If I do say so myself ๐ #ABACBS2025
Haha Thanks! Putting the โTed Lasso of Australian Bioinformaticsโ on my speaker bio!
November 26, 2025 at 10:10 AM
Haha Thanks! Putting the โTed Lasso of Australian Bioinformaticsโ on my speaker bio!
I wasnโt going to single you out in my speech @hdashnow.bsky.social but our @combine1.bsky.social shenanigans are a big part of my success!
November 26, 2025 at 10:07 AM
I wasnโt going to single you out in my speech @hdashnow.bsky.social but our @combine1.bsky.social shenanigans are a big part of my success!
Thanks for nominating me!
November 26, 2025 at 10:04 AM
Thanks for nominating me!
Reposted by Dr Andrew Lonsdale
You won Andrew! @lonsbio.bsky.social #ABACBS2025
November 25, 2025 at 10:30 AM
You won Andrew! @lonsbio.bsky.social #ABACBS2025
Reposted by Dr Andrew Lonsdale
PeterMac @petermaccc.bsky.social representing at #abacbs2025 What a community ๐
November 26, 2025 at 1:03 AM
PeterMac @petermaccc.bsky.social representing at #abacbs2025 What a community ๐
COMBINE and ABACBS lucked out that day!
November 26, 2025 at 10:02 AM
COMBINE and ABACBS lucked out that day!
The beauty of Old Conference Twitter was the combination of making the event feel more connected and the reach beyond the conference to those following along at home - thanks for bringing that back @notjustdna.bsky.social
November 26, 2025 at 9:59 AM
The beauty of Old Conference Twitter was the combination of making the event feel more connected and the reach beyond the conference to those following along at home - thanks for bringing that back @notjustdna.bsky.social
#abacbs2025 social media award goes to @jovmaksimovic.bsky.social ๐
November 26, 2025 at 6:17 AM
#abacbs2025 social media award goes to @jovmaksimovic.bsky.social ๐
Perl reference may or may not be on #confBingo but @torstenseemann.bsky.social was the first thing I though of when that language was mentioned. Congratulations? #abacbs2025
November 26, 2025 at 3:53 AM
Perl reference may or may not be on #confBingo but @torstenseemann.bsky.social was the first thing I though of when that language was mentioned. Congratulations? #abacbs2025
Reposted by Dr Andrew Lonsdale
Cancer Bioinformatics Australia was proud to be a supporting partner at #abacbs2025 and sponsor the Cancer and Molecular Medicine session.
For more cancer bioinformatics, follow us for updates on CBA which will be held in Brisbane in 2026
For more cancer bioinformatics, follow us for updates on CBA which will be held in Brisbane in 2026
November 26, 2025 at 1:21 AM
Cancer Bioinformatics Australia was proud to be a supporting partner at #abacbs2025 and sponsor the Cancer and Molecular Medicine session.
For more cancer bioinformatics, follow us for updates on CBA which will be held in Brisbane in 2026
For more cancer bioinformatics, follow us for updates on CBA which will be held in Brisbane in 2026
#confbingo Michael Hall with a bold choice in a lightning talk to ask for largest genome size - but it gets me a square ! #abacbs2025
November 25, 2025 at 11:21 PM
#confbingo Michael Hall with a bold choice in a lightning talk to ask for largest genome size - but it gets me a square ! #abacbs2025
@jovmaksimovic.bsky.social can't post right now on account of being up next - "Easily" capturing cancer fusions at single-cell resolution. The probe based 10X flex data as a great candidate for detecting fusions!
โซ๏ธ๐ด #abacbs2025
๐ตโช๏ธ
โซ๏ธ๐ด #abacbs2025
๐ตโช๏ธ
November 25, 2025 at 6:25 AM
@jovmaksimovic.bsky.social can't post right now on account of being up next - "Easily" capturing cancer fusions at single-cell resolution. The probe based 10X flex data as a great candidate for detecting fusions!
โซ๏ธ๐ด #abacbs2025
๐ตโช๏ธ
โซ๏ธ๐ด #abacbs2025
๐ตโช๏ธ
