Dr Andrew Lonsdale
@lonsbio.bsky.social
Bioinformatics post-doc at @petermaccc.bsky.social in the @aliciao.bsky.social Lab. Keen believer in the benefit of side projects. He/Him. Work/Life: 💻💻💻💻💻 👨👩👧👧 👨👩👧👧
Reposted by Dr Andrew Lonsdale
Thanks to the amazing Adelaide Bioinformatics community for making #ABACBS2025 an amazing event. We couldn’t have done it without you. A few more days of workshops to go before the festival finishes for another year 😀
November 26, 2025 at 10:02 AM
Thanks to the amazing Adelaide Bioinformatics community for making #ABACBS2025 an amazing event. We couldn’t have done it without you. A few more days of workshops to go before the festival finishes for another year 😀
Reposted by Dr Andrew Lonsdale
Awesome talk by @jovmaksimovic.bsky.social one detecting fusions in single cells with probes designed for 10X Flex. If I do say so myself 😜 #ABACBS2025
November 25, 2025 at 6:52 AM
Awesome talk by @jovmaksimovic.bsky.social one detecting fusions in single cells with probes designed for 10X Flex. If I do say so myself 😜 #ABACBS2025
Thanks for nominating me!
November 26, 2025 at 10:04 AM
Thanks for nominating me!
Reposted by Dr Andrew Lonsdale
You won Andrew! @lonsbio.bsky.social #ABACBS2025
November 25, 2025 at 10:30 AM
You won Andrew! @lonsbio.bsky.social #ABACBS2025
Reposted by Dr Andrew Lonsdale
PeterMac @petermaccc.bsky.social representing at #abacbs2025 What a community 😍
November 26, 2025 at 1:03 AM
PeterMac @petermaccc.bsky.social representing at #abacbs2025 What a community 😍
#abacbs2025 social media award goes to @jovmaksimovic.bsky.social 🎉
November 26, 2025 at 6:17 AM
#abacbs2025 social media award goes to @jovmaksimovic.bsky.social 🎉
Perl reference may or may not be on #confBingo but @torstenseemann.bsky.social was the first thing I though of when that language was mentioned. Congratulations? #abacbs2025
November 26, 2025 at 3:53 AM
Perl reference may or may not be on #confBingo but @torstenseemann.bsky.social was the first thing I though of when that language was mentioned. Congratulations? #abacbs2025
Reposted by Dr Andrew Lonsdale
Cancer Bioinformatics Australia was proud to be a supporting partner at #abacbs2025 and sponsor the Cancer and Molecular Medicine session.
For more cancer bioinformatics, follow us for updates on CBA which will be held in Brisbane in 2026
For more cancer bioinformatics, follow us for updates on CBA which will be held in Brisbane in 2026
November 26, 2025 at 1:21 AM
Cancer Bioinformatics Australia was proud to be a supporting partner at #abacbs2025 and sponsor the Cancer and Molecular Medicine session.
For more cancer bioinformatics, follow us for updates on CBA which will be held in Brisbane in 2026
For more cancer bioinformatics, follow us for updates on CBA which will be held in Brisbane in 2026
#confbingo Michael Hall with a bold choice in a lightning talk to ask for largest genome size - but it gets me a square ! #abacbs2025
November 25, 2025 at 11:21 PM
#confbingo Michael Hall with a bold choice in a lightning talk to ask for largest genome size - but it gets me a square ! #abacbs2025
@jovmaksimovic.bsky.social can't post right now on account of being up next - "Easily" capturing cancer fusions at single-cell resolution. The probe based 10X flex data as a great candidate for detecting fusions!
⚫️🔴 #abacbs2025
🔵⚪️
⚫️🔴 #abacbs2025
🔵⚪️
November 25, 2025 at 6:25 AM
@jovmaksimovic.bsky.social can't post right now on account of being up next - "Easily" capturing cancer fusions at single-cell resolution. The probe based 10X flex data as a great candidate for detecting fusions!
⚫️🔴 #abacbs2025
🔵⚪️
⚫️🔴 #abacbs2025
🔵⚪️
November 25, 2025 at 5:41 AM
Reposted by Dr Andrew Lonsdale
Loved hearing from Dr. Wytamma Wirth about a deep learning approach to bacterial taxonomic clasification, BABET. The coolest part for me was hearing how tiny the database is!
#ABACBS2025
⚫️🔴
🔵⚪️
#ABACBS2025
⚫️🔴
🔵⚪️
November 25, 2025 at 3:45 AM
Loved hearing from Dr. Wytamma Wirth about a deep learning approach to bacterial taxonomic clasification, BABET. The coolest part for me was hearing how tiny the database is!
#ABACBS2025
⚫️🔴
🔵⚪️
#ABACBS2025
⚫️🔴
🔵⚪️
What can be better than the conference opening done by the Governor South Australia herself ✨️
#ABCABS2025
#ABCABS2025
November 25, 2025 at 4:04 AM
Grateful to #COMBINE2025 and #ABCABS2025 for the opportunity to present my PhD work. Always inspiring to meet people who are as excited about your research as you are 😅
November 25, 2025 at 4:03 AM
ABACBS logo with emoji!?!! @phoebecarr.bsky.social is a genius #abacbs2025
Loved hearing from Dr. Wytamma Wirth about a deep learning approach to bacterial taxonomic clasification, BABET. The coolest part for me was hearing how tiny the database is!
#ABACBS2025
⚫️🔴
🔵⚪️
#ABACBS2025
⚫️🔴
🔵⚪️
November 25, 2025 at 3:49 AM
ABACBS logo with emoji!?!! @phoebecarr.bsky.social is a genius #abacbs2025
Judges are conferring and will pay “network hairball” for bingo even though that was actually a really good network diagram and the important nodes were highlighted and mentioned #cancersession #confbingo #abacbs2025
November 25, 2025 at 3:19 AM
Judges are conferring and will pay “network hairball” for bingo even though that was actually a really good network diagram and the important nodes were highlighted and mentioned #cancersession #confbingo #abacbs2025
#confbingo was always a great part of ABACBS #abacbs2025, and in honour of the celebrations of the society this year, it's back! Terms have been updated from the last iteration in 2018, but if there are any great suggestions let me know. Get your card and play along
confbingo.shinyapps.io/bingo25/
confbingo.shinyapps.io/bingo25/
confbingo.shinyapps.io
November 25, 2025 at 1:06 AM
#confbingo was always a great part of ABACBS #abacbs2025, and in honour of the celebrations of the society this year, it's back! Terms have been updated from the last iteration in 2018, but if there are any great suggestions let me know. Get your card and play along
confbingo.shinyapps.io/bingo25/
confbingo.shinyapps.io/bingo25/
This Blue Sky feed should capture all the off brand hashtags as well as the official #abacbs2025
bsky.app/profile/did:...
bsky.app/profile/did:...
November 24, 2025 at 10:49 PM
This Blue Sky feed should capture all the off brand hashtags as well as the official #abacbs2025
bsky.app/profile/did:...
bsky.app/profile/did:...
November 23, 2025 at 11:15 AM
Reposted by Dr Andrew Lonsdale
Only 13 days, 12 hours, 45 minutes, and 5 seconds until #ABACBS2025!
Check out the full program and you can still register (dinner & workshops are almost sold out though!) www.abacbs.org/abacbs2025
Check out the full program and you can still register (dinner & workshops are almost sold out though!) www.abacbs.org/abacbs2025
ABACBS 2025 Conference
Adelaide, South Australia. Nov. 24-
www.abacbs.org
November 10, 2025 at 12:44 AM
Only 13 days, 12 hours, 45 minutes, and 5 seconds until #ABACBS2025!
Check out the full program and you can still register (dinner & workshops are almost sold out though!) www.abacbs.org/abacbs2025
Check out the full program and you can still register (dinner & workshops are almost sold out though!) www.abacbs.org/abacbs2025
Less than a month until #abacbs25 and I have a very important question for y'all in the Australian Bioinformatics and Computational Biology community - should we revive Conference Bingo?
October 29, 2025 at 12:15 PM
Less than a month until #abacbs25 and I have a very important question for y'all in the Australian Bioinformatics and Computational Biology community - should we revive Conference Bingo?
Reposted by Dr Andrew Lonsdale
My first CRAN package! 🤓
Two of my favourite UpSet plot packages have been caught out by recent ggplot2 updates. That has cascaded into some Bioconductor packages failing (mine + others), so I figured I'd add another UpSet plot option to the mix. Hopefully this can help stabilise things a bit.
Two of my favourite UpSet plot packages have been caught out by recent ggplot2 updates. That has cascaded into some Bioconductor packages failing (mine + others), so I figured I'd add another UpSet plot option to the mix. Hopefully this can help stabilise things a bit.
New on CRAN: SimpleUpset (0.1.2). View at https://CRAN.R-project.org/package=SimpleUpset
SimpleUpset: Create Upset Plots
Create Upset plots using a combination of 'ggplot2' and 'patchwork'.
CRAN.R-project.org
October 7, 2025 at 1:01 AM
My first CRAN package! 🤓
Two of my favourite UpSet plot packages have been caught out by recent ggplot2 updates. That has cascaded into some Bioconductor packages failing (mine + others), so I figured I'd add another UpSet plot option to the mix. Hopefully this can help stabilise things a bit.
Two of my favourite UpSet plot packages have been caught out by recent ggplot2 updates. That has cascaded into some Bioconductor packages failing (mine + others), so I figured I'd add another UpSet plot option to the mix. Hopefully this can help stabilise things a bit.
Reposted by Dr Andrew Lonsdale
barbieQ: An R software package for analysing barcode count data from clonal tracking experiments https://www.biorxiv.org/content/10.1101/2025.09.11.675529v1
September 15, 2025 at 2:48 AM
barbieQ: An R software package for analysing barcode count data from clonal tracking experiments https://www.biorxiv.org/content/10.1101/2025.09.11.675529v1