Reposted by Jacob Baker
Our paper demonstrating that within-species warfare interactions are ecologically important on human skin is now published in Nature Micro! www.nature.com/articles/s41...
June 30, 2025 at 12:26 PM
Our paper demonstrating that within-species warfare interactions are ecologically important on human skin is now published in Nature Micro! www.nature.com/articles/s41...
Taxa is hiring! We're looking for a Computational Biologist to spearhead the analysis of massive genomic datasets for our flagship probiotics. Exciting science, great team, and transparent compensation. Apply here 👇
Taxa hiring Computational Biologist in San Francisco, CA | LinkedIn
Posted 4:13:15 PM. The OpportunityWe are looking for a talented Computational Biologist to spearhead the analysis of…See this and similar jobs on LinkedIn.
www.linkedin.com
April 4, 2025 at 8:16 PM
Taxa is hiring! We're looking for a Computational Biologist to spearhead the analysis of massive genomic datasets for our flagship probiotics. Exciting science, great team, and transparent compensation. Apply here 👇
Reposted by Jacob Baker
PHLAME is available to try out on GitHub:
github.com/quevan/phlame
github.com/quevan/phlame
GitHub - quevan/phlame
Contribute to quevan/phlame development by creating an account on GitHub.
github.com
February 11, 2025 at 11:06 PM
PHLAME is available to try out on GitHub:
github.com/quevan/phlame
github.com/quevan/phlame
Reposted by Jacob Baker
Excited to share my preprint describing a new microbiome analysis method, PHLAME, for detecting strain-level associations in difficult sample types. 🧵
www.biorxiv.org/content/10.1...
This work was done with my great coauthors and my amazing advisor @contaminatedsci.bsky.social
www.biorxiv.org/content/10.1...
This work was done with my great coauthors and my amazing advisor @contaminatedsci.bsky.social
Intraspecies associations from strain-rich metagenome samples
Genetically distinct strains of a species can vary widely in phenotype, reducing the utility of species-resolved microbiome measurements for detecting associations with health or disease. While metage...
www.biorxiv.org
February 11, 2025 at 11:06 PM
Excited to share my preprint describing a new microbiome analysis method, PHLAME, for detecting strain-level associations in difficult sample types. 🧵
www.biorxiv.org/content/10.1...
This work was done with my great coauthors and my amazing advisor @contaminatedsci.bsky.social
www.biorxiv.org/content/10.1...
This work was done with my great coauthors and my amazing advisor @contaminatedsci.bsky.social
Ever wondered about the origin of the bacteria that call our faces home? 🤔 Our new preprint dives into the fascinating dynamics of the human facial skin microbiome (FSM) and explores the natural history of important microbiome species on people at high resolution. 🧫🧵
Highly-resolved within-species dynamics in the human facial skin microbiome https://www.biorxiv.org/content/10.1101/2024.01.10.575018v1
Highly-resolved within-species dynamics in the human facial skin microbiome https://www.biorxiv.org/content/10.1101/2024.01.10.575018v1
Human facial skin microbiomes (FSMs) on adults are dominated by just two bacterial species, Cutibact
www.biorxiv.org
January 11, 2024 at 5:48 PM
Ever wondered about the origin of the bacteria that call our faces home? 🤔 Our new preprint dives into the fascinating dynamics of the human facial skin microbiome (FSM) and explores the natural history of important microbiome species on people at high resolution. 🧫🧵