phy_papers
@phypapers.bsky.social
Continuous feed for phylogenetics papers from PubMed, arXiv, bioRxiv, and EcoEvoRxiv. Run by @roblanfear.bsky.social
Make your own literature bot with these instructions: https://github.com/roblanf/phypapers
Make your own literature bot with these instructions: https://github.com/roblanf/phypapers
Complete chloroplast genome data of Plumbago indica L. a prominent medicinal plant https://pubmed.ncbi.nlm.nih.gov/41586076/
January 27, 2026 at 10:40 AM
Complete chloroplast genome data of Plumbago indica L. a prominent medicinal plant https://pubmed.ncbi.nlm.nih.gov/41586076/
PCR-based detection of Enterocytozoon bieneusi in diarrheic patients from Guangdong, Shandong, Shanghai, and Zhejiang Provinces, China: a study on prevalence and genotypic characteristics https://pubmed.ncbi.nlm.nih.gov/41586313/
January 27, 2026 at 10:07 AM
PCR-based detection of Enterocytozoon bieneusi in diarrheic patients from Guangdong, Shandong, Shanghai, and Zhejiang Provinces, China: a study on prevalence and genotypic characteristics https://pubmed.ncbi.nlm.nih.gov/41586313/
Molecular investigation on hazelnut-associated Fusarium isolates belonging to the Fusarium citricola species complex https://pubmed.ncbi.nlm.nih.gov/41586354/
January 27, 2026 at 9:34 AM
Molecular investigation on hazelnut-associated Fusarium isolates belonging to the Fusarium citricola species complex https://pubmed.ncbi.nlm.nih.gov/41586354/
Genetic landscape of Italian SRLV: insights from passive surveillance-based phylogenetic analysis https://pubmed.ncbi.nlm.nih.gov/41586368/
January 27, 2026 at 9:01 AM
Genetic landscape of Italian SRLV: insights from passive surveillance-based phylogenetic analysis https://pubmed.ncbi.nlm.nih.gov/41586368/
Novel snake Circovirus from alpine pit viper (Gloydius strauchi) in China: evidence of a mammal-avian genetic recombinant https://pubmed.ncbi.nlm.nih.gov/41586373/
January 27, 2026 at 8:27 AM
Novel snake Circovirus from alpine pit viper (Gloydius strauchi) in China: evidence of a mammal-avian genetic recombinant https://pubmed.ncbi.nlm.nih.gov/41586373/
Putative azithromycin resistance mutations in Chlamydia trachomatis are globally distributed but arose before azithromycin was discovered https://pubmed.ncbi.nlm.nih.gov/41586501/
January 27, 2026 at 7:54 AM
Putative azithromycin resistance mutations in Chlamydia trachomatis are globally distributed but arose before azithromycin was discovered https://pubmed.ncbi.nlm.nih.gov/41586501/
Genomic-Based Epidemiological Analysis of the Post-Pandemic Mycoplasma pneumoniae Resurgence https://pubmed.ncbi.nlm.nih.gov/41583905/
January 27, 2026 at 7:21 AM
Genomic-Based Epidemiological Analysis of the Post-Pandemic Mycoplasma pneumoniae Resurgence https://pubmed.ncbi.nlm.nih.gov/41583905/
Postharvest fruit rot of apple in the Loess Plateau region of China caused by Neocyphella psychrotropha sp. nov., representing a new family in Agaricales (Basidiomycota) https://pubmed.ncbi.nlm.nih.gov/41581230/
January 27, 2026 at 6:48 AM
Postharvest fruit rot of apple in the Loess Plateau region of China caused by Neocyphella psychrotropha sp. nov., representing a new family in Agaricales (Basidiomycota) https://pubmed.ncbi.nlm.nih.gov/41581230/
Phylogenomics of poachers (Agonidae) and the evolution of armor in cottoid fishes (Perciformes: Cottoidei) https://pubmed.ncbi.nlm.nih.gov/41581679/
January 27, 2026 at 6:15 AM
Phylogenomics of poachers (Agonidae) and the evolution of armor in cottoid fishes (Perciformes: Cottoidei) https://pubmed.ncbi.nlm.nih.gov/41581679/
Clonal replacement by a P1-1/ST3 lineage in pediatric Mycoplasma pneumoniae, Jinan, China, 2021-2024 https://pubmed.ncbi.nlm.nih.gov/41586312/
January 27, 2026 at 5:42 AM
Clonal replacement by a P1-1/ST3 lineage in pediatric Mycoplasma pneumoniae, Jinan, China, 2021-2024 https://pubmed.ncbi.nlm.nih.gov/41586312/
Mutations in SARS-CoV-2 spike protein identified by mass spectrometry based phylogenetics and their structural and functional consequences https://pubmed.ncbi.nlm.nih.gov/41587096/
January 27, 2026 at 5:09 AM
Mutations in SARS-CoV-2 spike protein identified by mass spectrometry based phylogenetics and their structural and functional consequences https://pubmed.ncbi.nlm.nih.gov/41587096/
The first mitochondrial genome sequence and phylogenetic analysis of Clinostomum piscidium (Platyhelminthes: Clinostomidae): a first representative from India https://pubmed.ncbi.nlm.nih.gov/41581766/
January 27, 2026 at 4:36 AM
The first mitochondrial genome sequence and phylogenetic analysis of Clinostomum piscidium (Platyhelminthes: Clinostomidae): a first representative from India https://pubmed.ncbi.nlm.nih.gov/41581766/
A phylogenetic contribution to understanding the panzootic spread of African swine fever: from the global to the local scale https://pubmed.ncbi.nlm.nih.gov/41583793/
January 27, 2026 at 4:03 AM
A phylogenetic contribution to understanding the panzootic spread of African swine fever: from the global to the local scale https://pubmed.ncbi.nlm.nih.gov/41583793/
Assessment of phylogenetic informativeness in mitochondrial and nuclear genes for mammalian systematics using sparse learning https://pubmed.ncbi.nlm.nih.gov/41584516/
January 27, 2026 at 3:30 AM
Assessment of phylogenetic informativeness in mitochondrial and nuclear genes for mammalian systematics using sparse learning https://pubmed.ncbi.nlm.nih.gov/41584516/
Genetic landscape of Italian SRLV: insights from passive surveillance-based phylogenetic analysis https://pubmed.ncbi.nlm.nih.gov/41586368/
January 27, 2026 at 2:57 AM
Genetic landscape of Italian SRLV: insights from passive surveillance-based phylogenetic analysis https://pubmed.ncbi.nlm.nih.gov/41586368/
Phylogenomics of poachers (Agonidae) and the evolution of armor in cottoid fishes (Perciformes: Cottoidei) https://pubmed.ncbi.nlm.nih.gov/41581679/
January 27, 2026 at 2:24 AM
Phylogenomics of poachers (Agonidae) and the evolution of armor in cottoid fishes (Perciformes: Cottoidei) https://pubmed.ncbi.nlm.nih.gov/41581679/
Mutations in SARS-CoV-2 spike protein identified by mass spectrometry based phylogenetics and their structural and functional consequences https://pubmed.ncbi.nlm.nih.gov/41587096/
January 27, 2026 at 1:51 AM
Mutations in SARS-CoV-2 spike protein identified by mass spectrometry based phylogenetics and their structural and functional consequences https://pubmed.ncbi.nlm.nih.gov/41587096/
NLR immune receptors can exhibit tissue-specific expression patterns across legume species https://www.biorxiv.org/content/10.64898/2026.01.25.701577v1
January 27, 2026 at 1:18 AM
NLR immune receptors can exhibit tissue-specific expression patterns across legume species https://www.biorxiv.org/content/10.64898/2026.01.25.701577v1
Phylogenetic support of pebS as a phage-exclusive auxiliary metabolic gene https://www.biorxiv.org/content/10.64898/2026.01.23.701310v1
January 27, 2026 at 12:45 AM
Phylogenetic support of pebS as a phage-exclusive auxiliary metabolic gene https://www.biorxiv.org/content/10.64898/2026.01.23.701310v1
Genome-Guided Characterization of Weissella Species Highlights Strain-Specific Functional Traits Relevant to Food Fermentation and Probiotics https://www.biorxiv.org/content/10.64898/2026.01.23.701356v1
January 27, 2026 at 12:12 AM
Genome-Guided Characterization of Weissella Species Highlights Strain-Specific Functional Traits Relevant to Food Fermentation and Probiotics https://www.biorxiv.org/content/10.64898/2026.01.23.701356v1
Evolutionary history and functional divergence of hydroxycarboxylic acid receptors in primates https://www.biorxiv.org/content/10.64898/2026.01.23.701403v1
January 26, 2026 at 11:39 PM
Evolutionary history and functional divergence of hydroxycarboxylic acid receptors in primates https://www.biorxiv.org/content/10.64898/2026.01.23.701403v1
antigen-prime: Simulating coupled genetic and antigenic evolution of influenza virus https://www.biorxiv.org/content/10.64898/2026.01.23.701420v1
January 26, 2026 at 11:06 PM
antigen-prime: Simulating coupled genetic and antigenic evolution of influenza virus https://www.biorxiv.org/content/10.64898/2026.01.23.701420v1
Systematic reassessment of Ambiphrya and Apiosoma (Ciliophora, Peritrichia), with morpho-molecular characterization of two epibiotic ciliates from rainbow trout in Korea https://pubmed.ncbi.nlm.nih.gov/41579655/
January 26, 2026 at 6:48 PM
Systematic reassessment of Ambiphrya and Apiosoma (Ciliophora, Peritrichia), with morpho-molecular characterization of two epibiotic ciliates from rainbow trout in Korea https://pubmed.ncbi.nlm.nih.gov/41579655/
Comparative analysis of the NAC gene family in five Polygonaceae species, focusing on Rheum officinale Baill https://pubmed.ncbi.nlm.nih.gov/41579693/
January 26, 2026 at 3:31 PM
Comparative analysis of the NAC gene family in five Polygonaceae species, focusing on Rheum officinale Baill https://pubmed.ncbi.nlm.nih.gov/41579693/
Emergence of blaNDM-carrying Escherichia coli ST167 isolate in rural communities in western Shandong Province, China https://pubmed.ncbi.nlm.nih.gov/41579931/
January 26, 2026 at 12:14 PM
Emergence of blaNDM-carrying Escherichia coli ST167 isolate in rural communities in western Shandong Province, China https://pubmed.ncbi.nlm.nih.gov/41579931/