Yale Computational Biology and Biomedical Informatics (CBB)
@yalecbb.bsky.social
Student-run account for the Yale CBB graduate program. Yale has interdepartmental Ph.D. and terminal M.S. programs in Computational Biology and Biomedical Informatics (CBB). For details, see: https://cbb.yale.edu
The CBB Journal Club series is beginning this week. Christine Dien and Lisa Chen (@YaleCBB Ph.D. candidates) will lead the session by presenting selected scientific articles. Please check the post below for additional details.
February 3, 2026 at 2:56 PM
The CBB Journal Club series is beginning this week. Christine Dien and Lisa Chen (@YaleCBB Ph.D. candidates) will lead the session by presenting selected scientific articles. Please check the post below for additional details.
Chang Lu, Anna Su, and Suchen Zheng, Ph.D. candidates in @YaleCBB, will be presenting the final RIP talk of the school year. Please see the details below for more information.
January 27, 2026 at 3:18 PM
Chang Lu, Anna Su, and Suchen Zheng, Ph.D. candidates in @YaleCBB, will be presenting the final RIP talk of the school year. Please see the details below for more information.
[1/2] Giacomo Marino is a first-year CBB PhD student who earned his bachelor’s degree from Brown University, where he double majored in neuroscience and computer science. His research interests focus on genomic foundation models and large language models.
January 23, 2026 at 3:53 PM
[1/2] Giacomo Marino is a first-year CBB PhD student who earned his bachelor’s degree from Brown University, where he double majored in neuroscience and computer science. His research interests focus on genomic foundation models and large language models.
Jenel Armstrong and Burhan Sabuwala, @YaleCBB Ph.D. candidates, will be presenting their RIP talks this week
January 12, 2026 at 8:52 PM
Jenel Armstrong and Burhan Sabuwala, @YaleCBB Ph.D. candidates, will be presenting their RIP talks this week
Happy new year! @YaleCBB PhD students will resume weekly Research-in-Progress (RIP) talks, followed by Journal Club (JC) presentations.
A Ram and Noah Yann Lee, @YaleCBB PhD candidates, will be presenting their RIP talks this week.
A Ram and Noah Yann Lee, @YaleCBB PhD candidates, will be presenting their RIP talks this week.
January 5, 2026 at 6:06 PM
Happy new year! @YaleCBB PhD students will resume weekly Research-in-Progress (RIP) talks, followed by Journal Club (JC) presentations.
A Ram and Noah Yann Lee, @YaleCBB PhD candidates, will be presenting their RIP talks this week.
A Ram and Noah Yann Lee, @YaleCBB PhD candidates, will be presenting their RIP talks this week.
[1/4] Jon Mallen is a first-year CBB PhD student who earned his bachelor’s degree in Applied Mathematics - Biology from Brown University. His research focuses on developing analytical methods for multiplexed single-cell multi-omics data and emerging data modalities.
December 18, 2025 at 4:12 PM
[1/4] Jon Mallen is a first-year CBB PhD student who earned his bachelor’s degree in Applied Mathematics - Biology from Brown University. His research focuses on developing analytical methods for multiplexed single-cell multi-omics data and emerging data modalities.
Suchen Zheng and Dingyao Zhang, @YaleCBB Ph.D. candidates, will be presenting their RIP talks this week. Please check the post below for more details.
December 15, 2025 at 6:41 PM
Suchen Zheng and Dingyao Zhang, @YaleCBB Ph.D. candidates, will be presenting their RIP talks this week. Please check the post below for more details.
Ao Huang, @YaleCBB Ph.D. candidate, will be presenting his RIP talk on "Epigenetic poising in immune response to vaccination”.
December 8, 2025 at 4:30 PM
Ao Huang, @YaleCBB Ph.D. candidate, will be presenting his RIP talk on "Epigenetic poising in immune response to vaccination”.
Tianyu Liu, @YaleCBB Ph.D. candidate, will be presenting his RIP talk on "Scientific Autonomous Generalist Agent".
December 1, 2025 at 6:31 PM
Tianyu Liu, @YaleCBB Ph.D. candidate, will be presenting his RIP talk on "Scientific Autonomous Generalist Agent".
[1/2] Gabrianne Ivey is a first-year CBB PhD student who earned her bachelor’s degree in Cell and Molecular Biology at Appalachian State University and her master’s degree in Mathematical Sciences at Clemson University.
November 21, 2025 at 4:29 PM
[1/2] Gabrianne Ivey is a first-year CBB PhD student who earned her bachelor’s degree in Cell and Molecular Biology at Appalachian State University and her master’s degree in Mathematical Sciences at Clemson University.
Jessica Kasamoto and Weihao Zhao, @YaleCBB Ph.D. candidates, will be presenting their RIP talks this week. More details shared in the post below.
November 17, 2025 at 3:34 PM
Jessica Kasamoto and Weihao Zhao, @YaleCBB Ph.D. candidates, will be presenting their RIP talks this week. More details shared in the post below.
Harry Abiri and Cole Jensen, Yale CBB Ph.D. candidates, will be presenting their RIP talks on "Transformer-Based PLMs to Understand the Immune System Language" and “Inferring Naive B Cell Sequences from Clonal Lineages”.
November 10, 2025 at 9:21 PM
Harry Abiri and Cole Jensen, Yale CBB Ph.D. candidates, will be presenting their RIP talks on "Transformer-Based PLMs to Understand the Immune System Language" and “Inferring Naive B Cell Sequences from Clonal Lineages”.
Jess Graham and Andy Chu, Yale CBB Ph.D. candidates, will be presenting their RIP talks on "Mapping the Antigenic Landscape to Predict Immunotherapy Response in Renal Cell Carcinoma" and "Leveraging a Poisson Mixed-Effect Framework to Uncover Dynamic Single-Cell Expression QTLs".
November 3, 2025 at 3:33 PM
Jess Graham and Andy Chu, Yale CBB Ph.D. candidates, will be presenting their RIP talks on "Mapping the Antigenic Landscape to Predict Immunotherapy Response in Renal Cell Carcinoma" and "Leveraging a Poisson Mixed-Effect Framework to Uncover Dynamic Single-Cell Expression QTLs".
Reposted by Yale Computational Biology and Biomedical Informatics (CBB)
Interested in pursuing a PhD in Computational Biology and Biomedical Informatics (CBB) at Yale?
Join us for a CBB PhD Virtual Open House
Tuesday, November 11 | 8:00–9:00 PM ET
👉 Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
@yalecbb.bsky.social
Join us for a CBB PhD Virtual Open House
Tuesday, November 11 | 8:00–9:00 PM ET
👉 Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
@yalecbb.bsky.social
October 31, 2025 at 10:43 PM
Interested in pursuing a PhD in Computational Biology and Biomedical Informatics (CBB) at Yale?
Join us for a CBB PhD Virtual Open House
Tuesday, November 11 | 8:00–9:00 PM ET
👉 Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
@yalecbb.bsky.social
Join us for a CBB PhD Virtual Open House
Tuesday, November 11 | 8:00–9:00 PM ET
👉 Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
@yalecbb.bsky.social
Curious about PhD life at Yale’s Computational Biology & Biomedical Informatics (CBB) program? 🧬💻
Join our Virtual Open House on Nov 11, 8–9 PM ET to hear from faculty, ask questions, and explore the program!
📍 Zoom | Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
Join our Virtual Open House on Nov 11, 8–9 PM ET to hear from faculty, ask questions, and explore the program!
📍 Zoom | Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
October 29, 2025 at 2:36 PM
Curious about PhD life at Yale’s Computational Biology & Biomedical Informatics (CBB) program? 🧬💻
Join our Virtual Open House on Nov 11, 8–9 PM ET to hear from faculty, ask questions, and explore the program!
📍 Zoom | Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
Join our Virtual Open House on Nov 11, 8–9 PM ET to hear from faculty, ask questions, and explore the program!
📍 Zoom | Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
Yunzhe Jiang, Yale CBB Ph.D. candidate, will be presenting his RIP talk on "Comprehensive Analysis of Pseudogene Expression in Human and Macaque Brains compared with Other Tissues".
October 27, 2025 at 1:58 PM
Yunzhe Jiang, Yale CBB Ph.D. candidate, will be presenting his RIP talk on "Comprehensive Analysis of Pseudogene Expression in Human and Macaque Brains compared with Other Tissues".
Yuhang Chen, Yale CBB Ph.D. candidate, will be presenting her RIP talk on "Personalized Mapping of Allele-Specific Chromatin Accessibility at Single-Cell Resolution".
October 20, 2025 at 3:49 PM
Yuhang Chen, Yale CBB Ph.D. candidate, will be presenting her RIP talk on "Personalized Mapping of Allele-Specific Chromatin Accessibility at Single-Cell Resolution".
Reposted by Yale Computational Biology and Biomedical Informatics (CBB)
Interested in pursuing a PhD in Computational Biology and Biomedical Informatics (CBB) at Yale?
Join us for the CBB PhD Virtual Open House
Tuesday, October 21 | 8:00–9:00 PM ET
👉 Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
@yalecbb.bsky.social
Join us for the CBB PhD Virtual Open House
Tuesday, October 21 | 8:00–9:00 PM ET
👉 Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
@yalecbb.bsky.social
October 16, 2025 at 1:26 AM
Interested in pursuing a PhD in Computational Biology and Biomedical Informatics (CBB) at Yale?
Join us for the CBB PhD Virtual Open House
Tuesday, October 21 | 8:00–9:00 PM ET
👉 Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
@yalecbb.bsky.social
Join us for the CBB PhD Virtual Open House
Tuesday, October 21 | 8:00–9:00 PM ET
👉 Register here: yalesurvey.ca1.qualtrics.com/jfe/form/SV_...
@yalecbb.bsky.social
[1/3] Join Us for the CBB PhD Virtual Open House
Tuesday, October 21 | 8:00–9:00 PM ET | Zoom (link provided upon registration)
Interested in pursuing a PhD in Computational Biology and Biomedical Informatics (CBB) at Yale?
Tuesday, October 21 | 8:00–9:00 PM ET | Zoom (link provided upon registration)
Interested in pursuing a PhD in Computational Biology and Biomedical Informatics (CBB) at Yale?
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October 15, 2025 at 4:32 PM
[1/3] Join Us for the CBB PhD Virtual Open House
Tuesday, October 21 | 8:00–9:00 PM ET | Zoom (link provided upon registration)
Interested in pursuing a PhD in Computational Biology and Biomedical Informatics (CBB) at Yale?
Tuesday, October 21 | 8:00–9:00 PM ET | Zoom (link provided upon registration)
Interested in pursuing a PhD in Computational Biology and Biomedical Informatics (CBB) at Yale?
Mingze Dong and Jake Sumner, Yale CBB Ph.D. candidates, will be presenting their RIP talks on "Understanding and Enhancing Mask-Based Pretraining towards Universal Biological Representations" and "Modeling Protein Polymers at Different layers of Coarse-Graining".
October 13, 2025 at 5:22 PM
Mingze Dong and Jake Sumner, Yale CBB Ph.D. candidates, will be presenting their RIP talks on "Understanding and Enhancing Mask-Based Pretraining towards Universal Biological Representations" and "Modeling Protein Polymers at Different layers of Coarse-Graining".
We're excited to introduce our incoming CBB PhD cohort! Each month, we'll spotlight a new student who has volunteered to share a bit about themselves.This month, we're pleased to feature Emilee Grisham, a first-year CBB PhD student.
October 6, 2025 at 5:51 PM
We're excited to introduce our incoming CBB PhD cohort! Each month, we'll spotlight a new student who has volunteered to share a bit about themselves.This month, we're pleased to feature Emilee Grisham, a first-year CBB PhD student.
Kriti Agrawal and Andrew Jia, Yale CBB Ph.D. candidates, will be presenting their RIP talks on "Deciphering Disease Dynamics using Spatial Transcriptomics" and "Genomic predictors of recurrent pregnancy loss".
September 29, 2025 at 3:21 PM
Kriti Agrawal and Andrew Jia, Yale CBB Ph.D. candidates, will be presenting their RIP talks on "Deciphering Disease Dynamics using Spatial Transcriptomics" and "Genomic predictors of recurrent pregnancy loss".
Ruiqi Li and Donglu Bai, @YaleCBB Ph.D. candidates, will be presenting their RIP talks on "Cluster-Independent Multiscale Marker Identification in Single-cell RNA-seq Data using Localized Marker Detector (LMD)" and "Joint Model of Cell-type Specific RNA and Protein Expression".
September 24, 2025 at 5:11 PM
Ruiqi Li and Donglu Bai, @YaleCBB Ph.D. candidates, will be presenting their RIP talks on "Cluster-Independent Multiscale Marker Identification in Single-cell RNA-seq Data using Localized Marker Detector (LMD)" and "Joint Model of Cell-type Specific RNA and Protein Expression".
For this week's RIP talk, Wes Lewis, a CBB Ph.D. candidate, will present his research project on "Identifying Evolutionary Signatures in Popular Music".
September 15, 2025 at 2:50 PM
For this week's RIP talk, Wes Lewis, a CBB Ph.D. candidate, will present his research project on "Identifying Evolutionary Signatures in Popular Music".
With the start of the new academic year, Yale CBB PhD students will begin presenting at the weekly Research-in-Progress (RIP) talks and journal clubs (JC)
Michelle Yu, a CBB Ph.D. candidate, will be presenting her RIP talk on "Using graph neural network to predict effects of genetic perturbations".
Michelle Yu, a CBB Ph.D. candidate, will be presenting her RIP talk on "Using graph neural network to predict effects of genetic perturbations".
September 10, 2025 at 5:34 PM
With the start of the new academic year, Yale CBB PhD students will begin presenting at the weekly Research-in-Progress (RIP) talks and journal clubs (JC)
Michelle Yu, a CBB Ph.D. candidate, will be presenting her RIP talk on "Using graph neural network to predict effects of genetic perturbations".
Michelle Yu, a CBB Ph.D. candidate, will be presenting her RIP talk on "Using graph neural network to predict effects of genetic perturbations".