Alireza Mashaghi
@alirezamashaghi.bsky.social
1.7K followers 260 following 46 posts
Scientist, Physician, University Professor (UHD) at Leiden University, Scientist at Harvard, ETH Zürich Alumni; Views my own. Website: https://www.mashaghilab.org
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alirezamashaghi.bsky.social
PhD student Vasily Akulov from our group is presenting our collaborative research with Eva Estébanez-Perpiñá’s group at the EMBO Workshop in Palermo, Italy!

meetings.embo.org/event/25-str...

#EMBO #StructuralBiology #IDP #Topology
alirezamashaghi.bsky.social
On extracellular #biomolecular condensates!

We demonstrate that phase-separated #condensate #droplets can form and function in the #extracellular environment and may interact with cells!
www.sciencedirect.com/science/arti...
#CellBiology #Biophysics #ChemicalEngineering #SyntheticBiology #ChemSky
alirezamashaghi.bsky.social
Check out our research on Semantic Topology at the 63rd Annual Meeting of the Association for Computational Linguistics (ACL 2025) in Vienna next week!

#ACL2025 #Interdisciplinary #Semantics
alirezamashaghi.bsky.social
Semantic Topology: a New Perspective for Communication Style Characterization

aclanthology.org/2025.finding...

#Linguistics #NLProc #ACL2025NLP #ACL2025
alirezamashaghi.bsky.social
On disordered topologically compact states in intrinsically disordered proteins! We explored this concept in the context of the human Glucocorticoid Receptor.
pubs.acs.org/doi/10.1021/...

#ChemSky #IDP #Protein #Biophysics #Topology #CompChem
alirezamashaghi.bsky.social
New Boltzmann Medalist Mehran Kardar at StatPhys29 in Florence, showing the first handmade slide that led to the #KPZ equation. #StatisticalPhysics #Physics Photo: Andrea Gabrielli
alirezamashaghi.bsky.social
Team snapshot after our regular group meeting — this time with a great talk by Muriel Hammond on intrinsically disordered proteins!
alirezamashaghi.bsky.social
For those interested in topological analysis of biomolecular condensates!

Article 1: link.springer.com/article/10.1...
Article 2: www.sciencedirect.com/science/arti...

#Topology #Condensate #PhaseSeparation #Aggregation #ChemSky #Biophysics #Polymer #Nanoscience
alirezamashaghi.bsky.social
PhD student Laurens Heling from my laboratory will be presenting a the #LACDR Spring Symposium!

"Single Molecule Analysis Reveals Allosteric Regulation of #Androgen #Receptor DNA Binding​"

#SingleMolecule #Biophysics #Endocrinology
Reposted by Alireza Mashaghi
leidenscience.bsky.social
Researchers at Leiden University have created a unique model that mimics how disease develops after a dengue infection. This 'dengue-on-a-chip' model helps them study the virus more effectively. The timing is crucial, as climate change is causing dengue to spread worldwide.
Read more:
Leiden scientists create first-ever dengue-on-a-chip to study this deadly virus
Researchers at Leiden University have created a unique model that mimics how disease develops after a dengue infection. This 'dengue-on-a-chip' model helps them study the virus more effectively. The t...
www.universiteitleiden.nl
alirezamashaghi.bsky.social
At NWO Physics conference in Veldhoven! Our team presented on biomolecular condensates and circuit topology!

#NWO #Physics #NWOPhysics #SoftMatter #Topology #Materials
alirezamashaghi.bsky.social
A glimpse into our research at the exciting intersection of physical sciences and medicine/pharmacy!
www.youtube.com/watch?v=a4jR...

#interdisciplinary #Medicine #Physics #Chemistry #Engineering #Mathematics #Computational #SocialScience
The Mashaghi Lab for Interdisciplinary Medical Innovations
YouTube video by Alireza Mashaghi Lab
www.youtube.com
alirezamashaghi.bsky.social
On topological analysis of single-cell HiC data!
#genome #chromatin #bioinformatics #SingleCell

link.springer.com/protocol/10....
www.sciencedirect.com/science/arti...
alirezamashaghi.bsky.social
"Substance P: From Pain to Cancer" is now in print!
We contributed a chapter on immunobiology and pharmacology of neuropeptide substance P!

www.sciencedirect.com/science/arti...
#immunology #neurology #neuropeptide #pharmacology #ChemSky
alirezamashaghi.bsky.social
Inspiring talk by Evan Spruijt at NWO Chain 2024! He shared exciting insights into how coacervate-based and liposome-based #protocells come together to facilitate complex chemistry related to the origin of life on Earth!

#Evolution #OriginofLife #Biomolecular #Condensate #ChemSky
alirezamashaghi.bsky.social
While human #proteins span a wide range of molecular weights, from approximately 0.26 to 4000 kDa, human chemokines are restricted to a narrow range of about 8 to 14 kDa. We asked whether there might be an optimality in #cellular #communications.
arxiv.org/abs/2412.00771
#Immunology #Chemokine
alirezamashaghi.bsky.social
Our work on the cover of Materials Advances!

Single-cell analysis of innate immune cell mechanics: an application to cancer immunology

pubs.rsc.org/en/content/a...

#immunology #innateimmunity #immunomechanics #mechanobiology #SingleCell
alirezamashaghi.bsky.social
On catalytic microswimmers: the motion of catalytically active colloids approaching a surface

arxiv.org/abs/2411.11656
#Colloids #ActiveMatter #ChemSky #Catalysis
alirezamashaghi.bsky.social
Celebrating 40 years of Biopharmaceutical Sciences at the Leiden Academic Centre for Drug Research! Douwe Breimer reminded us that multidisciplinarity has been a key element of this program since Day 1.

#LeidenUniversity #LACDR #Pharmacy #PharmaSky #MedSky #ChemSky #PharmaFab