@aybukey.bsky.social
16 followers 21 following 2 posts
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bethcimini.bsky.social
Episode 15 - do your images look, well, weird when you open them on your computer? Bad? Weird-and-bad? While we can't tell you EXACTLY what's going on, in this edition of Ask Erin/Dear Beth, @erinweisbart.bsky.social and I go over the most common "ugh, why does it look like THAT?" cases.
aybukey.bsky.social
Checkout our paper that was the result of a great community workshop and collaboration, on AI dataset guidelines:
bioimagearchive.bsky.social
🎉 Our paper “MIFA: Metadata, Incentives, Formats and Accessibility guidelines to improve the reuse of AI datasets for bioimage analysis” is out in @natmethods.nature.com!
Community-driven standards to make bioimage data AI-ready & reusable.
👉 www.nature.com/articles/s41... #AI #Bioimaging #FAIRdata
aybukey.bsky.social
Honoured to be featured - and even prouder of what the @bioimagearchive.bsky.social team is building together for the life sciences community.
ebi.embl.org
Meet Aybuke Kupcu Yoldas 🇹🇷🇬🇧 our BioImage Archive Data Project Leader.

Aybuke swapped telescopes for microscopes and stars ⭐ for cells a few years ago, when she pivoted from astrophysics to bioimaging.

She now helps make bioimages easy to access and reuse.

www.ebi.ac.uk/about/news/p...
We are EMBL: Aybuke Kupcu Yoldas on trading stars for cells
Aybuke Kupcu Yoldas, Senior Imaging Bioinformatician at EMBL-EBI, talks about the Bioimage Archive and her journey from astrophysics to biology
www.ebi.ac.uk
Reposted
joshmoore.bsky.social
Journals, confs, repos—

Please 🙏 provide a form of bulk author upload. I've just retyped 28 authors 6 times due to upload errors & I'm still not done....

Shout out to @biorxivpreprint.bsky.social as one example.

Even better: let's build this into @orcid.org have have it automated. 😍
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eurobioimaging.bsky.social
We are recruiting the next cohort of #EuroBioImaging Scientific Ambassadors! If you are passionate about open science & imaging and want to enhance your network - or learn new skills - please apply!🔽
www.eurobioimaging.eu/scientific-a...
Help us spread the word about this fantastic opportunity 🔄
Reposted
bioimagearchive.bsky.social
Like this beautiful #Tribolium embryo showing the expression of different gap genes 🔬🪲✨ (www.ebi.ac.uk/biostudies/b...)
Reposted
bioimagearchive.bsky.social
We finally made it to BlueSky and we can’t wait to engage with the #Bioimaging community here! We are @ebi.embl.org data resource for biological images, so follow us for updates on our latest developments, and of course for mesmerising images.
Reposted
boghuma.bsky.social
I can't find African Scientists and researchers easily on here. As the second largest continent with 1.3 billion inhabitants our perspectives matter. I'm creating a starterpack to find folks, follow them and amplify them. If you are an African Scientist let me know below so I can add you. Thanks.
Reposted
eurobioimaging.bsky.social
Looking for a recipe for depositing bioimage #data in the
Bioimage Archive? Check out the step-by-step process developed by #EuroBioImaging's FAIR Image Data Steward published in ELIXIR's #FAIRdata Cookbook⤵️
faircookbook.elixir-europe.org/content/reci...
Reposted
joelluethi.bsky.social
This week, we're hosting the #OME_NGFF_Hackathon 2024 at the BioVisionCenter at the University of Zurich. We're bringing together 40 motivated researchers and specialist for #OMEZarr workflows, #OMEZarr Python tools & #OMEZarr Java tools. (1/3)
Hackathon group picture in the lecture room Hackathon group picture in the restaurant (where not everyone fit on the picture unfortunately) Josh Moore giving a talk at the hackathon Matt McCormick asking a question