Benjamin Rombaut
berombau.bsky.social
Benjamin Rombaut
@berombau.bsky.social
🧑🏻‍💻 AI Engineer in bioimaging 🧬
Reposted by Benjamin Rombaut
We're excited to share that our preprint on anndataR, a new package bringing Python's AnnData to R, is now available on bioRxiv 🎉

🔗 Read the paper: www.biorxiv.org/content/10.1...
💻 Check the package in action: anndatar.data-intuitive.com
August 25, 2025 at 3:24 PM
Reposted by Benjamin Rombaut
Join us at 18:00 CET, March 4, Benjamin Rombaut will speak about Harpy, a spatial proteomics tool, as well as other tools from the Saeys lab! For more information, check out the Github: buff.ly/3XnViQl , and lab website: buff.ly/3XlL6HX !

Find the zoom link here: buff.ly/3CArAjJ !
GitHub - saeyslab/harpy: Single-cell spatial proteomics analysis that makes you happy!
Single-cell spatial proteomics analysis that makes you happy! - saeyslab/harpy
buff.ly
March 4, 2025 at 4:00 PM
Reposted by Benjamin Rombaut
This Tuesday at 2025-03-04 18:00 CET, Benjamin Rombaut @berombau.bsky.social will speak about Harpy, a spatial proteomics tool, as well as other tools from the Saeys lab @saeyslab.bsky.social ! For more information, check out the Github: buff.ly/3XnViQl , and lab website: buff.ly/3XlL6HX !
GitHub - saeyslab/harpy: Single-cell spatial proteomics analysis that makes you happy!
Single-cell spatial proteomics analysis that makes you happy! - saeyslab/harpy
github.com
February 28, 2025 at 11:45 PM
Reposted by Benjamin Rombaut
We are searching for a highly motivated and talented computational postdoc with an interest in translational spatial omics to join our team in Heidelberg. Apply now!

karriere.klinikum.uni-heidelberg.de/index.php?ac...
Postdoc – Computational Tissue Analysis (m/f/d)
karriere.klinikum.uni-heidelberg.de
January 30, 2025 at 10:23 AM
Reposted by Benjamin Rombaut
@berombau.bsky.social Grzegorz Bokota, Tong Li
SpatialData is already built on top of performant technologies, but we want to improve it even more! We created performance benchmarks and started optimizing the datasets subsetting operations. We also...
January 20, 2025 at 5:29 PM
Reposted by Benjamin Rombaut
✍️ New Bioconductor blog post on the SpatialData hackathon and workshop, organized by https://buff.ly/4j1UidT with Bioconductor participation. Check it out: https://buff.ly/4fM1qrH

Thanks @arturmansl.bsky.social‬ !

#Bioconductor #SpatialData #scverse #Bioinformatics #OpenScience #RStats
2024 SpatialData Workshop – Bioconductor community blog
R/Bioconductor developers participating in the 1st scverse SpatialData Workshop
buff.ly
January 9, 2025 at 12:11 PM