Biology Open
@biologyopen.bsky.social
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Facilitating rapid review for accessible research - an online only, #OpenAccess @biologists.bsky.social peer reviewed journal for research across all aspects of the biological sciences.
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biologyopen.bsky.social
Our Fast & Fair peer review initiative aims to provide authors with a first decision post review within 7 working days. Read articles handled through our Fast & Fair peer review in our collection. bit.ly/4fiAxNE

#fastandfairpeerreview
Fast & Fair peer review

A new initiative offering high-quality peer review within 7 working days of submission

Biology Open logo to the left
Fast & Fair peer review
biologyopen.bsky.social
Bats perform flights with continual altitude changes rather than flying at a constant altitude. Gottfried Sachs provides an explanation for this by showing that flights with continual altitude changes constitute a fuel-saving flight mode in bats. 🦇 doi.org/10.1242/bio....
Cycle of powered-gliding/climbing flight. A cycle of powered-gliding/climbing flight is presented in the upper part, and a glide with a fixed wing posture in the lower part. The grey arrow shows how the distance covered in the powered glide is increased as compared to the glide with a fixed wing posture. Furthermore, the relationships concerning forces, speeds and descent angles are shown in boxes next to the respective trajectories. The forces are the drag D, lift L and thrust T. The speeds are the airspeed V and the descent rate Vs. The descent angles are denoted by γpg and γgl.
biologyopen.bsky.social
Our Fast & Fair peer review initiative aims to provide authors with a first decision post review within 7 working days. Read articles handled through our Fast & Fair peer review in our collection. bit.ly/4fiAxNE

#fastandfairpeerreview
Fast & Fair peer review

A new initiative offering high-quality peer review within 7 working days of submission

Biology Open logo to the left
biologyopen.bsky.social
@adamdownunder.bsky.social, @craigefranklin.bsky.social & co expose clownfish embryos to UV radiation (UVR) corresponding to water depths reflective of their settlement; mimicking what could happen in a future coral reef with fewer structures shielding against UVR. doi.org/10.1242/bio....
The effect of UVR (UVB: 280-315 nm) across developmental age (dpf) of clownfish (A. ocellaris) embryos. Embryos were exposed to either control (no UVR; pink colour bar) or UVR levels representing the within-depth range of A. ocellaris: 6 m (low UVR treatment; 80 µW m2; green colour bar) or 2 m (high UVR treatment; 280 µW m2; blue colour bar) (Braun et al., 2016). UVR exposure occurred for 2 h daily from when eggs were laid (0 dpf) until hatched at 8-9 dpf. On 2 and 5 dpf, individual embryos were collected for (A) mass (mg; n=15 per age per treatment group), and (B) yolk sac volume (mm3; n=15 per age per treatment group). (C) DNA damage (concentration of CPD) only was measurable in embryos exposed to high UVR treatment only (n=13 measured in 2 dpf embryos, and n=8 measured in 5 dpf embryos). The experiment was replicated three times per treatment using two different parent pairs. In all three panels, predicted Bayesian posterior distributions are shown with symbols and error bars representing the median and 0.95 and 0.8 quartile-based credible intervals, respectively.
biologyopen.bsky.social
Our Fast & Fair peer review initiative aims to provide authors with a first decision post review within 7 working days. Read articles handled through our Fast & Fair peer review in our collection. bit.ly/4fiAxNE

#fastandfairpeerreview



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Fast & Fair peer review

A new initiative offering high-quality peer review within 7 working days of submission

Biology Open logo to the left
Fast & Fair peer review
Fast & Fair peer review

A new initiative offering high-quality peer review within 7 working days of submission

Biology Open logo to the left
Fast & Fair peer review
biologyopen.bsky.social
Thomas & co present an open-source 3D Slicer extension that reduces photogrammetry error by ∼ 15% on delicate rodent skulls, providing a convenient interface for generating 3D models of biological specimens from photographs. doi.org/10.1242/bio....
Overview of the photogrammetry extension workflow using a mountain beaver skull dataset. (A) Example of one original photograph from the 320-image dataset, which was taken as the specimen mounted on a turntable. The photogrammetry user interface consists of two module tabs (Image Masking and NodeODM) that focus on different aspects of the workflow. (B) The Image Masking interface displaying a fully masked dataset. The left 2D view shows the original photograph overlaid with a blue mask generated using the SAM, highlighting the segmented specimen. The right 2D view presents the same image post-segmentation, with the background removed, isolating the skull. (C) ODM interface post-photogrammetry reconstruction with default parameters set in the Find GCP and Launch NodeODM Task subsections. The resulting reconstructed and textured 3D skull model is displayed imported directly into the 3D viewport via the 'Import Reconstructed Model' functionality.
biologyopen.bsky.social
Read more in our 'First person' interview with Matthew Penaso-Stinson & Summer Paulson, who conducted this research as PhD students in Jeremy Rotty's lab at Uniformed Services University of the Health Sciences, USA. doi.org/10.1242/bio....
Matthew Penaso-Stinson; and Summer Paulson.
biologyopen.bsky.social
Stinson & co show that macrophages migrate persistently after they transition from 2D adhesion to an adhesive confined environment. Migration is enhanced further if cells sense a fibronectin gradient.
doi.org/10.1242/bio....
TIRF microscopy showing murine macrophages (green) under agarose-induced confinement binding fibronectin (red) coating the chamber surface.
biologyopen.bsky.social
Debadas Sahoo & Sibakalyani Acharya reveal metabolic depression & suppression of the non-specific immune response in hibernating male common Asian toads, characterised by elevated oxidative stress markers in liver tissue, indicating a tissue-specific immune response. doi.org/10.1242/bio....
Non-specific immune status in terms of serum complement protein indicated by bacteria-killing ability (BKA), ROS level in liver tissue in terms of lipid peroxidation (LPO) or TBARS (Thiobarbituric acid reactive substance) formed and oxidised glutathione (GSSG)/reduced glutathione (GSH) ratio. (A) Bacteria killing ability (BKA), (B) LPO (TBARS), (C) GSSG/GSH ratio. Animals used in each group (n)=7. ***denotes significant differences between hibernating and active toads group at P<0.001.
Reposted by Biology Open
biologists.bsky.social
Our next extraordinary biologist is Mark Peifer, recent @biologists.bsky.social Director and a prolific author, having published in @dev-journal.bsky.social, @jcellsci.bsky.social and @biologyopen.bsky.social. #100biologists
@peiferlabunc.bsky.social
The Company of Biologists 100 logo to the left and QR code to the right.
 
Portrait of Mark Peifer to the left, text to the right
 
100 extraordinary biologists

Mark Peifer

Mark Peifer is a recent Company Director and a prolific author, having published in Development, Journal of Cell Science and Biology Open. Mark is a cell and developmental biologist at the University of North Carolina, USA, investigating the epithelial tissues that form the basic architectural unit of our bodies and of those of other animals.

#100biologists #biologists100
biologyopen.bsky.social
This article was handled through our Fast & Fair peer review workflow. This initiative aims to provide authors with a first decision post review within 7 working days. Read more articles handled through our Fast & fair peer review in our collection. bit.ly/4fiAxNE
Fast & Fair peer review

A new initiative offering high-quality peer review within 7 working days of submission

Biology Open logo to the left
Fast & Fair peer review
biologyopen.bsky.social
Adapting gait to varying speeds and inclines is essential for navigating complex environments. Shizuku Terui & co investigate how critical kinematic variables, which reflect how the body manages momentum transfer between steps, adapt to changes in speed and incline. doi.org/10.1242/bio....
Participants walked on a treadmill equipped with an incline function under conditions combining speed and incline, and their motion was captured using a motion capture system to obtain the coordinates of the CoM. For the uphill conditions, the anteroposterior coordinates were transformed using trigonometric functions to align with the gait path, similar to the level conditions. Therefore, both the anteroposterior direction and the horizontal plane defined by the anteroposterior and mediolateral directions were made parallel to the gait path in both level and uphill conditions. Parts of the figure were drawn by using pictures from Servier Medical Art. Servier Medical Art by Servier is licensed under a Creative Commons Attribution 3.0 Unported License (https://creativecommons.org/licenses/by/3.0/).
Reposted by Biology Open
biologists.bsky.social
We are highlighting Cathy Jackson, @biologyopen.bsky.social Deputy Editor and an Editorial Advisory Board member at @jcellsci.bsky.social, as an extraordinary biologist this week. #100biologists @ijmonod.bsky.social
The Company of Biologists 100 logo to the left and QR code to the right.
 
Portrait of Cathy Jackson to the left, text to the right
 
100 extraordinary biologists

Cathy Jackson 

Cathy Jackson is a Biology Open Deputy Editor and an Editorial Advisory Board member at Journal of Cell Science. Cathy is a Research Director at the Institut Jacques Monod, France, investigating the molecular mechanisms regulating vesicular and lipid trafficking in yeast and mammalian cells.


#100biologists #biologists100
biologyopen.bsky.social
To know more about this research, read our 'First person' interview with Kishalay Ghosh and Rohit Iyer from the Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), India. doi.org/10.1242/bio....
Kishalay Ghosh and Rohit Iyer
biologyopen.bsky.social
#Drosophila larvae have a lymph gland with hematopoietic progenitors & subsequently differentiated hemocytes, similar to blood cells. Ghosh, Iyer et al. induce inflammation stress in different lymph gland cell subsets to examine how these progenitor cells respond to stress. doi.org/10.1242/bio....
Sustained upregulation of ISR pathway in Imd over-activation scenario in hematopoietic progenitors is capable of restoring hematopoiesis. Schematic of Gosh et al.'s working model summarizing how restoration of LG hematopoiesis occurs upon ectopic ISR upregulation in the hematopoietic progenitors in an Imd pathway over-activation genetic background (U). Created in BioRender. Khadilkar, R. J., (2025). https://BioRender.com/w52d960. This figure was sublicensed under CC-BY 4.0 terms. Scale bar: 50 µm (A-K′), 30 µm (M-R′).
biologyopen.bsky.social
The brain is the most metabolically active organ in the body and has a high demand for iron. Mariam Duhaini & co identify new molecular signals released by brain astrocytes under iron deficiency. These findings offer crucial insights into brain iron control. 🧠🐭
doi.org/10.1242/bio....
Experimental workflow and differential analysis of the astrocyte secretome under iron-deficient conditions. (A) Schematic of the experimental design. Primary astrocytes were isolated from neonatal mouse pups and cultured under control or iron-deficient conditions for 24 h, followed by collection of conditioned media and analysis by liquid chromatography-tandem mass spectrometry (LC-MS/MS).
biologyopen.bsky.social
Our Fast & Fair peer review initiative aims to provide authors with a first decision post review within 7 working days. Read articles handled through our Fast & Fair peer review in our collection. bit.ly/4fiAxNE

#fastandfairpeerreview
Fast & Fair peer review

A new initiative offering high-quality peer review within 7 working days of submission

Biology Open logo to the left
Fast & Fair peer review
biologyopen.bsky.social
Read our 'First person' interview with Ashley Gendreau, a research assistant in the lab of Roger Hanlon at @mblscience.bsky.social , investigating marine biology and animal behaviour, with a focus on how animals sense, move through and interact with their environments.

doi.org/10.1242/bio....
Ashley Gendreau
biologyopen.bsky.social
Ashley Gendreau, Roger Hanlon & co @mblscience.bsky.social show that despite having a highly decentralised nervous system, octopuses exhibit specialised & repeatable patterns of arm use, offering new insights into sensorimotor control in animals with nontraditional anatomies. doi.org/10.1242/bio....
Initial arm inserted into the dome. At the beginning of each experimental trial (n=117), octopuses (n=14 individual animals) most frequently used one of their four anterior arms as the initial arm inserted into the dome 75% of the time (blue rings: anterior=88 trials; orange rings: posterior=29 trials). Each insertion was recorded from a unique trial, and animal identity was tracked throughout. A significant anterior preference was detected (Wilcoxon signed-rank test, two-tailed: W=76.0, P=0.006). No significant difference was found among individual anterior arms (Friedman's ANOVA: χ2=2.70, d.f.=3, P=0.441).
biologyopen.bsky.social
To learn more about this research, read our First person interview with Angela Fan and @yoldasyildiz.bsky.social. doi.org/10.1242/bio....
Angela Fan Yoldas Yildiz
biologyopen.bsky.social
Angela Fan, @yoldasyildiz.bsky.social & co show the importance of studying alcohol effects in more realistic systems that reflect the complexity of the living brain, showing that alcohol during adolescence can affect RNA regulation in very specific ways. 🧠https://doi.org/10.1242/bio.062010
hnRNP A1 (red) typically resides in the nucleus (blue), but relocalizes to the cytoplasm after 2-h ethanol exposure in IVB cells (rat hypothalamic neuronal-derived cell line), and the cells also exhibit cellular swelling.
biologyopen.bsky.social
Arnon Pudgerd and colleagues show that ecdysteroid stimulated bursicon expression and improved the immune response against bacterial challenges. doi.org/10.1242/bio....
Hematopoietic cell proliferation and expression of immune-related genes following 20E injection. Histological section of hematopoietic tissue showing mitotic cells after injection with PBS (A,B) and 20E (C,D). Black arrows indicate the mitotic cells. (E) Histogram showing a higher average number of mitotic cells in hematopoietic tissue following 20E compared to PBS injection. Histogram demonstrating an increase in ALF and CHF mRNA expression in hemocytes (F) following 20E injection, while the expression of ALF and CHF mRNA was consistent in hematopoietic tissue (G) (n=5). Asterisks indicate statistically significant differences (***P<0.001).
Reposted by Biology Open
biologists.bsky.social
We are featuring Daisy Pineda-Suazo, who was interviewed for @biologyopen.bsky.social's ‘First Person’ series in 2024 after her first-author publication in the journal, as an extraordinary biologist. #100biologists #NPAW2025
The Company of Biologists 100 logo to the left and QR code to the right.
 
Portrait of Daisy Pineda-Suazo to the left, text to the right
 
100 extraordinary biologists

Daisy Pineda-Suazo

Daisy Pineda-Suazo was interviewed for Biology Open’s ‘First Person’ series in 2024 after her first-author publication on the detailed characterisation of digestive enzyme activity in Octopus maya. Daisy is a postdoctoral researcher at Universidad Nacional Autónoma de México, Mexico.

#100biologists #biologists100
Reposted by Biology Open
biologists.bsky.social
To celebrate the #NPAW2025 theme of communicating your science and research, we share advice and tips from our #SciCommConnect webinar, which discussed practical ways to help researchers deliver their message. Find out more bit.ly/3K6GeCC #LovePostdocs
SciCommConnect
Science communication, community connections

Monday 10 June 2024, 13:00 - 18:00 BST online event

Shareable science
Jamie Gallagher, science communicator and consultant
Three minute research talk competition

#DevBiolWriteClub
John Wallingford, Principal Investigator at UT Austin, USA
Writing sprints

the Node, preLights and FocalPlane logos
Reposted by Biology Open
the-node.bsky.social
Congratulations to the winners of our image competition with the @mblscience.bsky.social Embryology course. The winner of the Editor’s choice is an image of a anole lizard eye, acquired by Arthur Boutillon @campaslab.bsky.social.
thenode.biologists.com/results-from...
#devbio 🔬🎉
Development cover: Embryonic eye of an anole lizard stained for nuclei (DAPI, blue) and F-actin (Phalloidin, orange), imaged by spinning disc confocal microscopy and processed using ImageJ. The image was acquired at the 2025 MBL Embryology course by Arthur Boutillon and was the Editor's choice from the Node image competition.