Crick Image Analysis Team
@crick-ia-team.bsky.social
We are the Image Analysis Team at the Francis Crick Institute in London
https://www.crick.ac.uk/research/platforms-and-facilities/light-microscopy/image-analysis
https://www.crick.ac.uk/research/platforms-and-facilities/light-microscopy/image-analysis
Reposted by Crick Image Analysis Team
✨New Year's resolutions involve learning something new?✨
Then apply for our “Introduction to Image Analysis” workshop in Cardiff in May 2026! Deadline for applications is January 16th.
🔗⬇️
www.rms.org.uk/rms-event-ca...
@royalmicrosoc.bsky.social @david-j-barry.bsky.social @martinjones.bsky.social
Then apply for our “Introduction to Image Analysis” workshop in Cardiff in May 2026! Deadline for applications is January 16th.
🔗⬇️
www.rms.org.uk/rms-event-ca...
@royalmicrosoc.bsky.social @david-j-barry.bsky.social @martinjones.bsky.social
Introduction to Image Analysis 2026
www.rms.org.uk
January 2, 2026 at 2:17 PM
✨New Year's resolutions involve learning something new?✨
Then apply for our “Introduction to Image Analysis” workshop in Cardiff in May 2026! Deadline for applications is January 16th.
🔗⬇️
www.rms.org.uk/rms-event-ca...
@royalmicrosoc.bsky.social @david-j-barry.bsky.social @martinjones.bsky.social
Then apply for our “Introduction to Image Analysis” workshop in Cardiff in May 2026! Deadline for applications is January 16th.
🔗⬇️
www.rms.org.uk/rms-event-ca...
@royalmicrosoc.bsky.social @david-j-barry.bsky.social @martinjones.bsky.social
Reposted by Crick Image Analysis Team
📣 Help spread the word! @globalbioimaging.bsky.social #Imaging4All — 3rd Call Open!
Fully funded mobility grants for low/middle-income country researchers to access imaging technologies for experiments and training.
🗓 Deadline: 28 Feb 2026
More info: globalbioimaging.org/i4a
Fully funded mobility grants for low/middle-income country researchers to access imaging technologies for experiments and training.
🗓 Deadline: 28 Feb 2026
More info: globalbioimaging.org/i4a
December 23, 2025 at 5:02 PM
📣 Help spread the word! @globalbioimaging.bsky.social #Imaging4All — 3rd Call Open!
Fully funded mobility grants for low/middle-income country researchers to access imaging technologies for experiments and training.
🗓 Deadline: 28 Feb 2026
More info: globalbioimaging.org/i4a
Fully funded mobility grants for low/middle-income country researchers to access imaging technologies for experiments and training.
🗓 Deadline: 28 Feb 2026
More info: globalbioimaging.org/i4a
Reposted by Crick Image Analysis Team
*APPLY NOW* for Introduction to Image Analysis 2026! 😃🔬
Great workshop designed to empower researchers with the necessary skills and tools to confidently analyse their data.
Apply by Fri, 16 Jan: https://ow.ly/hHRi50XNaG4
Great workshop designed to empower researchers with the necessary skills and tools to confidently analyse their data.
Apply by Fri, 16 Jan: https://ow.ly/hHRi50XNaG4
December 22, 2025 at 2:20 PM
*APPLY NOW* for Introduction to Image Analysis 2026! 😃🔬
Great workshop designed to empower researchers with the necessary skills and tools to confidently analyse their data.
Apply by Fri, 16 Jan: https://ow.ly/hHRi50XNaG4
Great workshop designed to empower researchers with the necessary skills and tools to confidently analyse their data.
Apply by Fri, 16 Jan: https://ow.ly/hHRi50XNaG4
Less than a month to go before applications close for the Introduction to Image Analysis workshop in Cardiff (deadline 16th January)!
@royalmicrosoc.bsky.social
www.rms.org.uk/rms-event-ca...
@royalmicrosoc.bsky.social
www.rms.org.uk/rms-event-ca...
Applications for the next @royalmicrosoc.bsky.social “Introduction to image analysis” workshop are now open!
Join us for 3 days in Cardiff in May to learn the foundations of #bioimageanalysis using Fiji, Python and @napari.org
www.rms.org.uk/rms-event-ca...
Join us for 3 days in Cardiff in May to learn the foundations of #bioimageanalysis using Fiji, Python and @napari.org
www.rms.org.uk/rms-event-ca...
Introduction to Image Analysis 2026
www.rms.org.uk
December 18, 2025 at 11:00 AM
Less than a month to go before applications close for the Introduction to Image Analysis workshop in Cardiff (deadline 16th January)!
@royalmicrosoc.bsky.social
www.rms.org.uk/rms-event-ca...
@royalmicrosoc.bsky.social
www.rms.org.uk/rms-event-ca...
Reposted by Crick Image Analysis Team
🌍 Imaging 4 All — 3rd Call Open!
Fully funded mobility grants for low/middle-income country researchers to access imaging technologies for experiments and training.
🗓 Deadline: 28 Feb 2026
More info: globalbioimaging.org/i4a
For questions: [email protected]
#Imaging4All
Fully funded mobility grants for low/middle-income country researchers to access imaging technologies for experiments and training.
🗓 Deadline: 28 Feb 2026
More info: globalbioimaging.org/i4a
For questions: [email protected]
#Imaging4All
December 15, 2025 at 4:19 PM
🌍 Imaging 4 All — 3rd Call Open!
Fully funded mobility grants for low/middle-income country researchers to access imaging technologies for experiments and training.
🗓 Deadline: 28 Feb 2026
More info: globalbioimaging.org/i4a
For questions: [email protected]
#Imaging4All
Fully funded mobility grants for low/middle-income country researchers to access imaging technologies for experiments and training.
🗓 Deadline: 28 Feb 2026
More info: globalbioimaging.org/i4a
For questions: [email protected]
#Imaging4All
We have a ✨new website✨ - go and take a look to meet our team, find out how you can work with us, and see our upcoming training events!
www.crick.ac.uk/research/pla...
www.crick.ac.uk/research/pla...
Image Analysis
The golden rule of image analysis is “garbage in, garbage out”, so we strongly encourage researchers to come and talk to us about their experimental plans before acquiring data.
www.crick.ac.uk
December 12, 2025 at 11:00 AM
We have a ✨new website✨ - go and take a look to meet our team, find out how you can work with us, and see our upcoming training events!
www.crick.ac.uk/research/pla...
www.crick.ac.uk/research/pla...
Ready for another workshop! Today we work with Fiji/ImageJ for an overview of reproducible image analysis and macro writing
December 5, 2025 at 10:05 AM
Ready for another workshop! Today we work with Fiji/ImageJ for an overview of reproducible image analysis and macro writing
Applications for the next @royalmicrosoc.bsky.social “Introduction to image analysis” workshop are now open!
Join us for 3 days in Cardiff in May to learn the foundations of #bioimageanalysis using Fiji, Python and @napari.org
www.rms.org.uk/rms-event-ca...
Join us for 3 days in Cardiff in May to learn the foundations of #bioimageanalysis using Fiji, Python and @napari.org
www.rms.org.uk/rms-event-ca...
Introduction to Image Analysis 2026
www.rms.org.uk
December 1, 2025 at 10:09 AM
Applications for the next @royalmicrosoc.bsky.social “Introduction to image analysis” workshop are now open!
Join us for 3 days in Cardiff in May to learn the foundations of #bioimageanalysis using Fiji, Python and @napari.org
www.rms.org.uk/rms-event-ca...
Join us for 3 days in Cardiff in May to learn the foundations of #bioimageanalysis using Fiji, Python and @napari.org
www.rms.org.uk/rms-event-ca...
No CBIAS would be complete without an image analysis workshop! Thanks Rocco, @giuliapaci.bsky.social and @makaefer.bsky.social for organising, we had fun helping out with teaching 🔬💻
And that’s a wrap for the @cbias.bsky.social napari workshop as well. Two days of learning, working collaboratively and finished off with a presentation from each of five project groups detailing the progress they made. Organised by Rocco D’Antuono, @giuliapaci.bsky.social and yours truly
November 28, 2025 at 7:45 AM
No CBIAS would be complete without an image analysis workshop! Thanks Rocco, @giuliapaci.bsky.social and @makaefer.bsky.social for organising, we had fun helping out with teaching 🔬💻
We wrapped up yesterday the 6th edition of the Crick BioImage Analysis Symposium (CBIAS) - look at all those (bio)image analysts!
November 26, 2025 at 10:14 AM
We wrapped up yesterday the 6th edition of the Crick BioImage Analysis Symposium (CBIAS) - look at all those (bio)image analysts!
Our team is busy organising #CBIAS2025 today and tomorrow! Follow the symposium hashtag to hear more about all the interesting discussions happening around all things bioimage analysis
November 24, 2025 at 11:34 AM
Our team is busy organising #CBIAS2025 today and tomorrow! Follow the symposium hashtag to hear more about all the interesting discussions happening around all things bioimage analysis
Reposted by Crick Image Analysis Team
UK Bioimaging @bioimaginguk.bsky.social launches User Access Fund for Researchers
Researchers can apply for up to £5k for access to bioimaging facilities at @calm-stp.bsky.social, @esric-imaging.bsky.social, KCL, Liverpool, Oxford Brookes & York.
First round deadline: 9 December 2025
Researchers can apply for up to £5k for access to bioimaging facilities at @calm-stp.bsky.social, @esric-imaging.bsky.social, KCL, Liverpool, Oxford Brookes & York.
First round deadline: 9 December 2025
UK Bioimaging Launches User Access Fund for Researchers - FocalPlane
UK Bioimaging Launches User Access Fund for Researchers - News
focalplane.biologists.com
November 17, 2025 at 10:25 AM
UK Bioimaging @bioimaginguk.bsky.social launches User Access Fund for Researchers
Researchers can apply for up to £5k for access to bioimaging facilities at @calm-stp.bsky.social, @esric-imaging.bsky.social, KCL, Liverpool, Oxford Brookes & York.
First round deadline: 9 December 2025
Researchers can apply for up to £5k for access to bioimaging facilities at @calm-stp.bsky.social, @esric-imaging.bsky.social, KCL, Liverpool, Oxford Brookes & York.
First round deadline: 9 December 2025
Full house for our monthly Image Analysis Club!
We discussed image data management and next generation file formats for image data with presentations from Ken Ho from the @crick.ac.uk and @dstansby.bsky.social from UCL
We discussed image data management and next generation file formats for image data with presentations from Ken Ho from the @crick.ac.uk and @dstansby.bsky.social from UCL
November 17, 2025 at 12:03 PM
Full house for our monthly Image Analysis Club!
We discussed image data management and next generation file formats for image data with presentations from Ken Ho from the @crick.ac.uk and @dstansby.bsky.social from UCL
We discussed image data management and next generation file formats for image data with presentations from Ken Ho from the @crick.ac.uk and @dstansby.bsky.social from UCL
Sara from our team has been busy in the last 3 days organising the 8th Crick Data Challenge, a friendly hackathon where attendees tackle research data testing their creativity and coding skills in new ways - congratulations on running a great event! 💻✨
crickdatachallenge.github.io/website/
crickdatachallenge.github.io/website/
November 14, 2025 at 2:22 PM
Sara from our team has been busy in the last 3 days organising the 8th Crick Data Challenge, a friendly hackathon where attendees tackle research data testing their creativity and coding skills in new ways - congratulations on running a great event! 💻✨
crickdatachallenge.github.io/website/
crickdatachallenge.github.io/website/
Reposted by Crick Image Analysis Team
Just 4 days until the start of I2K and its 33 totally free image analysis tutorials and events! Please share with your "home networks", especially early career researchers - the videos will be amazing and high-impact no matter how many people attend live, BUT (1/x)
November 13, 2025 at 2:32 PM
Just 4 days until the start of I2K and its 33 totally free image analysis tutorials and events! Please share with your "home networks", especially early career researchers - the videos will be amazing and high-impact no matter how many people attend live, BUT (1/x)
Another week, another training course!
We focused on #Python today, with our internal introductory workshop to image analysis.
Well-done to all attendees! 💻🔬and thanks to the “Bioinformatics and Biostatistics” and “Software Engineering and AI” teams for helping us deliver the course 🙏
We focused on #Python today, with our internal introductory workshop to image analysis.
Well-done to all attendees! 💻🔬and thanks to the “Bioinformatics and Biostatistics” and “Software Engineering and AI” teams for helping us deliver the course 🙏
November 7, 2025 at 6:06 PM
Another week, another training course!
We focused on #Python today, with our internal introductory workshop to image analysis.
Well-done to all attendees! 💻🔬and thanks to the “Bioinformatics and Biostatistics” and “Software Engineering and AI” teams for helping us deliver the course 🙏
We focused on #Python today, with our internal introductory workshop to image analysis.
Well-done to all attendees! 💻🔬and thanks to the “Bioinformatics and Biostatistics” and “Software Engineering and AI” teams for helping us deliver the course 🙏
Reposted by Crick Image Analysis Team
📢 Enhance your bioimage analysis skills - 2-day hands-on napari workshop.
Learn to:
- Set up conda envis install napari
- Navigate napari GUI install plugins
- Jupyter notebooks for basic IA
- Apply new skills to real datasets w expert guidance
📅 Apply by NOW!
www.crick.ac.uk/whats-on/cbi...
Learn to:
- Set up conda envis install napari
- Navigate napari GUI install plugins
- Jupyter notebooks for basic IA
- Apply new skills to real datasets w expert guidance
📅 Apply by NOW!
www.crick.ac.uk/whats-on/cbi...
CBIAS napari workshop 2025
www.crick.ac.uk
November 7, 2025 at 10:49 AM
📢 Enhance your bioimage analysis skills - 2-day hands-on napari workshop.
Learn to:
- Set up conda envis install napari
- Navigate napari GUI install plugins
- Jupyter notebooks for basic IA
- Apply new skills to real datasets w expert guidance
📅 Apply by NOW!
www.crick.ac.uk/whats-on/cbi...
Learn to:
- Set up conda envis install napari
- Navigate napari GUI install plugins
- Jupyter notebooks for basic IA
- Apply new skills to real datasets w expert guidance
📅 Apply by NOW!
www.crick.ac.uk/whats-on/cbi...
A day in the dark side, from light to electron microscopy image analysis!
We're attending today the @ccp-volumeem.bsky.social meeting, discussing approaches to build a collaborative computational community for volume electron microscopy
We're attending today the @ccp-volumeem.bsky.social meeting, discussing approaches to build a collaborative computational community for volume electron microscopy
November 3, 2025 at 12:58 PM
A day in the dark side, from light to electron microscopy image analysis!
We're attending today the @ccp-volumeem.bsky.social meeting, discussing approaches to build a collaborative computational community for volume electron microscopy
We're attending today the @ccp-volumeem.bsky.social meeting, discussing approaches to build a collaborative computational community for volume electron microscopy
And it’s a wrap! Thanks to all attendees for your hard work in analysing bioimages with open source software to make science more reproducible. Best of luck for your image analysis adventures!
October 28, 2025 at 9:24 PM
And it’s a wrap! Thanks to all attendees for your hard work in analysing bioimages with open source software to make science more reproducible. Best of luck for your image analysis adventures!
All set up and ready to go for our 2-day Introduction to Image Analysis workshop for external attendees at @crick.ac.uk!
With Sara Salgueiro Torres, @david-j-barry.bsky.social, @martinjones.bsky.social, @k-meech.bsky.social, @lankylaste.bsky.social and Cameron Shand
With Sara Salgueiro Torres, @david-j-barry.bsky.social, @martinjones.bsky.social, @k-meech.bsky.social, @lankylaste.bsky.social and Cameron Shand
October 27, 2025 at 4:33 PM
All set up and ready to go for our 2-day Introduction to Image Analysis workshop for external attendees at @crick.ac.uk!
With Sara Salgueiro Torres, @david-j-barry.bsky.social, @martinjones.bsky.social, @k-meech.bsky.social, @lankylaste.bsky.social and Cameron Shand
With Sara Salgueiro Torres, @david-j-barry.bsky.social, @martinjones.bsky.social, @k-meech.bsky.social, @lankylaste.bsky.social and Cameron Shand
Reposted by Crick Image Analysis Team
Want to automate workflows in #FIJI?
Don't know where to start?
We (@lankylaste.bsky.social, Alicja Skórkowska and Sara Salgueiro Torres) have added a step-by-step tutorial to the wiki to get you started.
Thanks @ctrue.bsky.social for adding!
imagej.github.io/tutorials/ba...
Don't know where to start?
We (@lankylaste.bsky.social, Alicja Skórkowska and Sara Salgueiro Torres) have added a step-by-step tutorial to the wiki to get you started.
Thanks @ctrue.bsky.social for adding!
imagej.github.io/tutorials/ba...
Batch Processing with the ImageJ Macro Language
The ImageJ wiki is a community-edited knowledge base on topics relating to ImageJ, a public domain program for processing and analyzing scientific images, and its ecosystem of derivatives and variants...
imagej.github.io
October 23, 2025 at 4:32 PM
Want to automate workflows in #FIJI?
Don't know where to start?
We (@lankylaste.bsky.social, Alicja Skórkowska and Sara Salgueiro Torres) have added a step-by-step tutorial to the wiki to get you started.
Thanks @ctrue.bsky.social for adding!
imagej.github.io/tutorials/ba...
Don't know where to start?
We (@lankylaste.bsky.social, Alicja Skórkowska and Sara Salgueiro Torres) have added a step-by-step tutorial to the wiki to get you started.
Thanks @ctrue.bsky.social for adding!
imagej.github.io/tutorials/ba...