Gabriel Ramírez-Vilchis
@gabrielramirezv.bsky.social
75 followers 170 following 2 posts
🌐 https://gabrielramirezv.github.io/ Undergraduate student in Genomic Sciences at #LCG-UNAM 🧬🇲🇽. I am interested in immunology 🛡️, neuroscience 🧠 and bioinformatics 👨🏻‍💻.
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Reposted by Gabriel Ramírez-Vilchis
mashaals.bsky.social
Our new work is now out in AJHG "Natural selection acting on complex traits hampers the predictive accuracy of polygenic scores in ancient samples." Great collaboration with @delvecchyo.bsky.social and Emilia Huerta-Sanchez, led by Valeria Añorve-Garibay.
Reposted by Gabriel Ramírez-Vilchis
hadley.nz
Happy 18th birthday ggplot2! #rstats
Balloon wall art inspired by the ggplot2 hex sticker. The display features a hexagonal frame made of black balloons, filled with white balloons inside and surrounded by a background of light and dark blue balloons. A line graph with black balloon segments and round coloured nodes runs across the centre, and the word “ggplot2” is spelled out in black balloon letters below the chart.
Reposted by Gabriel Ramírez-Vilchis
tommytang.bsky.social
A visual–omics foundation model to bridge histopathology with spatial transcriptomics www.nature.com/articles/s4...
Reposted by Gabriel Ramírez-Vilchis
sminmunologia.bsky.social
📢 ¡Te queremos ver en el XXVI Congreso Nacional de Inmunología en Chihuahua!

⌛No olvides que la fecha límite para enviar tus resúmenes se acerca. Para más información visita el sitio del congreso.
#InmunoCongreso #Chihuahua2025 #CongresoNacionaldeInmunología #SMInmunologia
Reposted by Gabriel Ramírez-Vilchis
cynthiasc.bsky.social
🚀 Interested in multimodal analysis with WNN in Seurat?
Check out my recent RStatClub presentation, where we dive into Jaccard, canonical gene expression, and Silhouette for clustering evaluation!
📺 Watch here: speakerdeck.com/cyntsc/clust...
📑 Slides: www.youtube.com/watch?v=mE77...
#RStats
Clustering methods in multiome scRNA-seq and scATAC-seq
Main topics covered on this talk: Introducing the Weighted-Nearest Neighbor (WNN) for multimodal analysis A glance of WNN clustering algorithms availa…
speakerdeck.com
Reposted by Gabriel Ramírez-Vilchis
martinowk.bsky.social
Our paper providing transcriptomic profiles of lateral septum (LS) cell types in human 🧠 is now online: www.cell.com/iscience/ful...

All data and code are publicly available online (links in the paper) and we provide an interactive web-based app to explore the data: libd.shinyapps.io/LS_snRNAseq/
Transcriptomic characterization of human lateral septum neurons reveals conserved and divergent marker genes across species
Neuroscience; Cellular neuroscience; Transcriptomics
www.cell.com
Reposted by Gabriel Ramírez-Vilchis
eugeniazarza.bsky.social
Axolotls have been important in Mexican culture since Aztec’s time. They’re named after the god Xolotl (monsters, fire, lightning). This amazing species is critically endangered in the wild, as it’s habitat is disappearing in Mexico City. Today is national Axolotl day! 🧪🐸🌎🇲🇽
An axolotl in a tank
gabrielramirezv.bsky.social
immunogenViewer package for R, developed by Katharina Waury, seems to be such a good way to analyze proteins in order to find targets for some antibodies!

You can find it in bioconductor.org/packages/rel...
gabrielramirezv.bsky.social
Single-cell RNA sequencing is very important when studying gene expression. I found scDotPlot package developed by @laufer.bsky.social, and I think it could be a very useful tool to analyze and plot scRNA-seq data using R.

You can find more information in bioconductor.org/packages/rel...