Galaxy Project
@galaxyproject.bsky.social
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Reproducible data science for everyone! #UseGalaxy https://galaxyproject.org/
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galaxyproject.bsky.social
Reminder: on Friday we are hosting a webinar for the NIAID-funded BRCs at 14:00 UTC. To join, you must register here first:
https://gxy.io/brc-webinar-reg

@bvbrc.bsky.social
BRC webinar infographic
galaxyproject.bsky.social
https://zenodo.org/records/16683440

##onboarding ##engagement ##EGD2025 ##community_engagement ##eurosciencegateway ##galaxyproject ##eosc ##adoption ##fair ##open_science (2/2)
galaxyproject.bsky.social
On Day 3 of European Galaxy Days, Nikolay Vazov, Volodymyr Savchenko, Anthony Bretaudeau, and Leandro Liborio presented Community engagement, adoption, and onboarding (EuroScienceGateway WP5).
Read more: https://galaxyproject.org/projects/esg/news/?tag=esg-wp5 (1/2)
Community engagement, adoption, and onboarding (EuroScienceGateway WP5 Nikolay) Community engagement, adoption, and onboarding (EuroScienceGateway WP5 Anthony) Community engagement, adoption, and onboarding (EuroScienceGateway WP5 Volodymyr) Community engagement, adoption, and onboarding (EuroScienceGateway WP5 Leandro)
galaxyproject.bsky.social
#infrastructure_model ##modular_design ##EGD2025 ##infrastructure ##sustainable ##eurosciencegateway ##galaxyproject ##eosc ##fair ##open_science (2/2)
galaxyproject.bsky.social
On Day 3 of European Galaxy Days, Sebastian Luna-Valero presented Building Blocks for a sustainable operating model (EuroScienceGateway WP4).
Read more: https://galaxyproject.org/projects/esg/news/?tag=esg-wp4
https://zenodo.org/records/15729502
https://zenodo.org/records/15827107 (1/2)
Building Blocks for a sustainable operating model (EuroScienceGateway WP4)
galaxyproject.bsky.social
https://zenodo.org/records/16761933
https://zenodo.org/records/15920451

##heterogenuous_compute ##EGD2025 ##distributed_network ##eurosciencegateway ##galaxyproject ##eosc ##fair ##pulsar_network ##open_science (2/2)
D3.1 Operations documentation on the Open Infrastructure deployment
Development of the Open Infrastructure and Pulsar Network to support distributed job execution and scalable Galaxy deployments across Europe. Project: EuroScienceGateway was funded by the European Union programme Horizon Europe (HORIZON-INFRA-2021-EOSC-01-04) under grant agreement number 101057388 and by UK Research and Innovation (UKRI) under the UK government’s Horizon Europe funding guarantee grant number 10038963. Document: D3.1 Operations documentation on the Open Infrastructure deployment Work Package: Work Package 3. Pulsar Network: Distributed heterogeneous compute. Task: Task 3.1 Develop and maintain an Open Infrastructure baseddeployment model for Pulsar endpoints. Task 3.3 Build a European-wide network of Pulsar sites. Task 3.5 Developing and maintaining national or domain-drivenGalaxy servers. Lead Beneficiary: INFN Contributing Beneficiary: INFN, ALU-FR, CNRS, CESNET, UiB, BSC, VIB, IISAS, TUBITAK and CNR Executive Summary Work Package 3 of the EuroScienceGateway project is divided into 5 tasks, aimed at bringing into production (TRL9) the Pulsar Network , a distributed computing network that allows public Galaxy servers to offload jobs to remote computing clusters provided by project partners. Specifically, this deliverable describes the work done in tasks 3.1, 3.2, 3.3 and 3.5. The main objectives of WP3 are: 1) to simplify the deployment and management of new Pulsar and Galaxy endpoints (T3.1 and T3.5), to make Pulsar compatible with the GA4GH TES specifications (T3.2), and to deploy new Pulsar endpoints (T3.3)
zenodo.org
galaxyproject.bsky.social
On Day 3 of European Galaxy Days, Marco Antonio Tangaro presented Pulsar Network: Distributed heterogenuous compute (EuroScienceGateway WP3).
Read more: https://galaxyproject.org/projects/esg/news/?tag=esg-wp3
https://pulsar-network.readthedocs.io/en/latest/ (1/2)
Pulsar Network: Distributed heterogenuous compute (EuroScienceGateway WP3)
galaxyproject.bsky.social
On Day 3 of European Galaxy Days, Eli Chadwick presented Stimulate FAIR and reusable research (EuroScienceGateway WP2).
Read more: https://galaxyproject.org/projects/esg/news/?tag=esg-wp2
https://zenodo.org/records/16992674
https://zenodo.org/records/13225792 (1/2)
Stimulate FAIR and reusable research (EuroScienceGateway WP2)
galaxyproject.bsky.social
Day 3 of European Galaxy Days, participants at CoFest and Hackathon.
More than 20 experts from microbiology to admins to tool and workflow developers are tackling challenges across every difficulty and domain.

##EGD2025 ##galaxyproject ##hackathon ##eosc ##cofest ##fair ##open_science
CoFest and Hackathon CoFest and Hackathon CoFest and Hackathon CoFest and Hackathon
galaxyproject.bsky.social
@https://bsky.app/profile/dadrasarmin.bsky.social
##EGD2025 ##coordination ##eurosciencegateway ##galaxyproject ##dissemination ##management ##eosc ##fair ##open_science (2/2)
dadrasarmin.bsky.social
bsky.app
galaxyproject.bsky.social
On Day 3 of European Galaxy Days, Björn Grüning, Anika Erxleben-Eggenhofer, and Armin Dadras presented Project management, coordination, and dissemination (EuroScienceGateway WP1).
Read more: https://galaxyproject.org/projects/esg/news/?tag=esg-wp1
https://zenodo.org/records/16909970 (1/2)
Project management, coordination, and dissemination (EuroScienceGateway WP1)
galaxyproject.bsky.social
Teresa Müller presented 'Exploring the Galaxy Training Network: What's Here, What's New' on Day 2 of European Galaxy Days.
Read more: https://training.galaxyproject.org/

##galaxy_training_network ##EGD2025 ##galaxy_training ##galaxyproject ##eosc ##open_science_training ##fair ##gtn ##open_science
Exploring the Galaxy Training Network: What's Here, What's New
galaxyproject.bsky.social
Marco Antonio Tangaro presented 'Laniakea Nebula: VPN-Based Isolation for Galaxy Private Deployments' on Day 2 of European Galaxy Days.
Read more: https://galaxyproject.org/use/laniakea/

##deployment ##EGD2025 ##vpn \isolation ##laniakeanebula ##galaxyproject ##eosc ##fair ##open_science
Laniakea Nebula: VPN-Based Isolation for Galaxy Private Deployments
galaxyproject.bsky.social
#fair ##features ##open_science (2/2)
galaxyproject.bsky.social
On Day 2 of European Galaxy Days, Eli Chadwick presented 'Highlighting RO-Crate features in Galaxy and why you should use them'.
Read more: https://www.researchobject.org/ro-crate/

@brcanalytics.bsky.social
##research_object ##fair_data ##EGD2025 ##fair_analysis ##galaxyproject ##ro_crate ##eosc (1/2)
Highlighting RO-Crate features in Galaxy and why you should use them
galaxyproject.bsky.social
On Day 2 of European Galaxy Days, Jérôme Detoc presented 'Galaxy Earth-System'.
Read more: https://earth-system.usegalaxy.eu/

##EGD2025 ##earth_system ##galaxyproject ##eosc ##fair ##open_science
Galaxy Earth-System
galaxyproject.bsky.social
Nikolay Vazov presented 'A 'trivial' task: how to access my files and projects on the HPC filesystem from Galaxy?' on Day 2 of European Galaxy Days.

##hpc ##EGD2025 ##filesystem ##galaxyproject ##eosc ##fair ##open_science
A 'trivial' task: how to access my files and projects on the HPC filesystem from galaxy?
galaxyproject.bsky.social
GCC can attest that Brno is a very nice location, and the Galaxy Europe team can confirm that it’s quite accessible by train (either via Prague or Vienna).

##EGD2025 ##tool_management ##galaxyproject ##automating ##eosc ##fair ##automation ##open_science (2/2)
galaxyproject.bsky.social
On Day 2 of European Galaxy Days, Martin Cech presented 'Automating Galaxy Tool Management Through a GitHub Repository Template'.
He also mentioned the upcoming Galaxy Admin Training in Brno.
https://galaxyproject.org/events/2025-admin-training-brno/
Everyone who participated in last year’s (1/2)
Automating Galaxy Tool Management Through a GitHub Repository Template
galaxyproject.bsky.social
Jain Smitesh presented 'Sustainability of Galaxy (EuroScienceGateway)' on Day 2 of European Galaxy Days.
Read more: https://doi.org/10.5281/zenodo.16030329

##galaxy ##EGD2025 ##eurosciencegateway ##galaxyproject ##eosc ##sustainability ##fair ##open_science
Sustainability of Galaxy (EuroScienceGateway)
galaxyproject.bsky.social
On Day 2 of European Galaxy Days, Anthony Bretaudeau presented 'Modern genome browsing in Galaxy with Jbrowse2'.
Read more: https://usegalaxy.eu/root?tool_id=jbrowse2

##genomics ##jbrowse2 ##EGD2025 ##genome ##galaxyproject ##eosc ##fair ##genome_browsing ##open_science
Modern genome browsing in Galaxy with Jbrowse2
galaxyproject.bsky.social
Lukasz Opiola presented 'Galaxy & Onedata integration, managing Galaxy data using Onedata, BYOD & BYOS' on Day 2 of European Galaxy Days.
Read more: https://onedata.org/

##EGD2025 ##data ##galaxyproject ##onedata ##data_access ##eosc ##fair ##integration ##open_science
Galaxy & Onedata integration, managing Galaxy data using Onedata, BYOD & BYOS
galaxyproject.bsky.social
On Day 2 of European Galaxy Days, Beatriz Serrano-Solano presented Update by the Imaging Community.
Read more: https://galaxyproject.org/community/sig/image-analysis/

@abretaud.bsky.social
##imaging_community ##bioimaging ##EGD2025 ##galaxyproject ##eosc ##fair ##community ##open_science
Update by the Imaging Community
galaxyproject.bsky.social
On Day 2 of European Galaxy Days, Marius van den Beek presented The Future of Galaxy Tools.
Read more: https://sci-scale.net/

##EGD2025 ##galaxyproject ##galaxy_tools ##eosc ##software ##fair ##open_science
The Future of Galaxy Tools