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Günter Klambauer @gklambauer.bsky.social · 1d

PAPER/ABSTRACT DEADLINE ALREADY END OF THIS WEEK!

ELLIS Machine Learning for Molecules workshop: moleculediscovery.github.io/workshop2025/

DON'T MISS THE DEADLINE: short papers or extended abstracts welcome!

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Günter Klambauer @gklambauer.bsky.social · 9d

ELLIS ML4Molecules workshop 2025

** Call for papers** is out: moleculediscovery.github.io/workshop2025/

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Günter Klambauer @gklambauer.bsky.social · 14d

Is Bluesky the actual dead Internet??

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Günter Klambauer @gklambauer.bsky.social · 15d

It's happening again!!!

ML4Molecules workshop 2025.

within the #ELLIS Unconference, preceding #EurIPS.

More infos: moleculediscovery.github.io/workshop2025/

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Günter Klambauer @gklambauer.bsky.social · 21d

Happy that IBM uses proper MLPs, i.e. self-normalizing networks, in their Flowstate model! ;)

P: arxiv.org/abs/2508.05287

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Günter Klambauer @gklambauer.bsky.social · 22d

Another win for xLSTM

hochreitersepp.bsky.social @hochreitersepp.bsky.social · 22d

xLSTM shines as an Electrocardiogram (ECG) foundation model: arxiv.org/abs/2509.10151

"xECG achieves superior performance over earlier approaches, defining a new baseline for future ECG foundation models."

xLSTM is perfectly suited for time series prediction as shown by TiRex.

Günter Klambauer @gklambauer.bsky.social · 22d

It just struck me that the ancient Greeks chose their twelve Olympian gods with gender parity..

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Günter Klambauer @gklambauer.bsky.social · Sep 8

We Austrians are fully aware that we are a democratic country now, but we still sneak in pictures of our monarchs... :)

Michael Bronstein @mmbronstein.bsky.social · Sep 8

@aithyra.bsky.social Symposium #AIforLifeScience: From Sequences to Structures — Al and the Protein Universe

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Günter Klambauer @gklambauer.bsky.social · Aug 13

Controversial posts are downranked on Blue sky????

Oh c'mon...

Günter Klambauer @gklambauer.bsky.social · Aug 11

Devastating blow for GNNs/MPNNs for chemistry and small molecules:

All of them are not statistically better than simple ECFP . Only our CLAMP model does the job ;)

P: arxiv.org/abs/2508.06199

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Günter Klambauer @gklambauer.bsky.social · Aug 12

Machine Learning-Driven Optimization of Specific, Compact, and Efficient Base Editors via Single-Round Diversification

New base editors designed and optimized with ML! Almost all ML-designed ones active in the lab tests!!

P: www.biorxiv.org/content/10.1...

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Günter Klambauer @gklambauer.bsky.social · Aug 11

Devastating blow for GNNs/MPNNs for chemistry and small molecules:

All of them are not statistically better than simple ECFP . Only our CLAMP model does the job ;)

P: arxiv.org/abs/2508.06199

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Günter Klambauer @gklambauer.bsky.social · Aug 11

Do you mean the linker??

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Günter Klambauer @gklambauer.bsky.social · Aug 11

Yes, I also expected that it internally calls rdkit..

Günter Klambauer @gklambauer.bsky.social · Aug 11

Just in: GPT-5 achieves AGI in chemical sciences!!1!!1!

Actually, NO! .... struggles with generating 2D graphs from SMILES.

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Günter Klambauer @gklambauer.bsky.social · Jul 26

We are currently trying to improve the usability of Prot-xLSTM -- we would be very happy to get your feedback!!!

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Günter Klambauer @gklambauer.bsky.social · Jul 26

Nice!!

Günter Klambauer @gklambauer.bsky.social · Jul 26

Great effort!!

Thinking about joining with my AI in Life Sciences group, too...

Is this an ELLIS event??

Who of those speakers will be on site??

Thanks!! 🙏

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Günter Klambauer @gklambauer.bsky.social · Jul 26

Great idea for a dataset and task! Thanks for using and assessing out Prot-xLSTM

Kevin K. Yang 楊凱筌 @kevinkaichuang.bsky.social · Jul 25

In 1965, Margaret Dayhoff published the Atlas of Protein Sequence and Structure, which collated the 65 proteins whose amino acid sequences were then known.

Inspired by that Atlas, today we are releasing the Dayhoff Atlas of protein sequence data and protein language models.

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Reposted by Günter Klambauer

hochreitersepp.bsky.social @hochreitersepp.bsky.social · Jun 4

We are soooo proud. Our European-developed TiRex is leading the field—significantly ahead of U.S. competitors like Amazon, Datadog, Salesforce, and Google, as well as Chinese models from companies such as Alibaba.

Michael Kopp @mkk20.bsky.social · Jun 2

Ever though you could get a 35 million parameter time series state-of-the art foundation model that you can run on embedded hardware? Thanks to @hochreitersepp.bsky.social and his team at NXAI, you can. Amazing work!
Paper: arxiv.org/abs/2505.23719
Code: github.com/NX-AI/tirex

TiRex: Zero-Shot Forecasting Across Long and Short Horizons with Enhanced In-Context Learning

In-context learning, the ability of large language models to perform tasks using only examples provided in the prompt, has recently been adapted for time series forecasting. This paradigm enables zero...

arxiv.org

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Reposted by Günter Klambauer

Michael Kopp @mkk20.bsky.social · Jun 2

Ever though you could get a 35 million parameter time series state-of-the art foundation model that you can run on embedded hardware? Thanks to @hochreitersepp.bsky.social and his team at NXAI, you can. Amazing work!
Paper: arxiv.org/abs/2505.23719
Code: github.com/NX-AI/tirex

TiRex: Zero-Shot Forecasting Across Long and Short Horizons with Enhanced In-Context Learning

In-context learning, the ability of large language models to perform tasks using only examples provided in the prompt, has recently been adapted for time series forecasting. This paradigm enables zero...

arxiv.org

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Günter Klambauer @gklambauer.bsky.social · Jun 1

I would. :)
- good overview of history of ai
- thoughts on capabilities of symbolic and sub-symbolic
- LLMs and how we should think of them
- how research works
- high-level thoughts on state of AI in Europe
- very compact ;)

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Günter Klambauer @gklambauer.bsky.social · May 30

Recommended read for the weekend: Sepp Hochreiter's book on AI!

Lots of fun anecdotes and easily accessible basics on AI!

www.beneventopublishing.com/ecowing/prod...

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Reposted by Günter Klambauer

fses91.bsky.social @fses91.bsky.social · May 22

Happy to introduce 🔥LaM-SLidE🔥!

We show how trajectories of spatial dynamical systems can be modeled in latent space by

--> leveraging IDENTIFIERS.

📚Paper: arxiv.org/abs/2502.12128
💻Code: github.com/ml-jku/LaM-S...
📝Blog: ml-jku.github.io/LaM-SLidE/
1/n

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Günter Klambauer @gklambauer.bsky.social · May 22

Latent Space Modeling of Spatial Dynamical Systems via
Linked Entities

LATENT DIFFUSION and GRAPH NEURAL NETWORKS finally combined!!

Best model for molecular dynamics of small molecules!!!

Paper: arxiv.org/abs/2502.121...
Blog: ml-jku.github.io/LaM-SLidE/

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Günter Klambauer @gklambauer.bsky.social · May 21

Lehrbuchbeispiel für digitale Abhängigkeit...

- Dabei gäbe es Open-Source LLMs die man für diesen simplen ChatBot verwenden könnte. Alle Daten würden bei RK NÖ bleiben und nicht mit Dritten geteilt.
- Man könnte sogar ein europäisches LLM verwenden...

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