Immunological Genome Project
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Immunological Genome Project
@immgen.bsky.social
The Immunological Genome Project (ImmGen) is a collaborative group of immunology and computational biology labs who join forces and expertise to perform a broad and deep dissection of the genome’s activity and its regulation in the murine immune system.
New ImmGen GenePage: Enter a gene. See the whole story at once.

The GenePage provides a unified platform for knowledge around a single gene, by combining ImmGen data external data and with AI-generated insights, all in one place.
www.immgen.org/ImmGenNews.h...
#Immgen #geneprofile #immunology
September 17, 2025 at 5:32 PM
The ImmGenMaps project, led by the Reina lab, aims to generate a comprehensive atlas of immune cells across mouse organs in space
www.immgen.org/ImmGenMaps
Spatial gene expression profiles with protein marker analysis, it captures immune cells in their natural tissue context #immgenmap #immuneatlas
March 14, 2025 at 6:03 PM
Dec 24: Hardy ImmGen participants braved the delightful weather in Boston for the annual ImmGen Workshop. A mix of exciting results from ongoing programs, talks of future directions, arguments over which is the most important immunological cell lineage.
And, of course, this year’s ImmGen T-shirt.
February 18, 2025 at 8:21 PM
GEM is retiring

With mixed feelings we announce the retirement of our Genome Expression Map databrowser. GEM provided a unique perspective into ImmGen data, allowing users to zoom in and out of the mouse genome.
Changes in GoogleMaps APIs made keeping it current too demanding. #GEM
February 18, 2025 at 8:13 PM
Jun 2024
First data release of ImmGenT!(cbdm.connect.hms.harvard.edu/ImmgenT/Publ...). Over 30 labs to profile every mouse T cell / location / state.
In collaboration with BioLegend. The dedicated browser is developed by Dania, Niket, and Brinda. #CITEseq #TCR-V #immgen #singleCell
February 18, 2025 at 6:40 PM
New Chromatin databrowser that maps main histone post-transcriptional modifications across the immune system of the mouse, from mast cells to CD8+ memory T cells. (CUT&RUN data, all from in primary cells ex-vivo) rstats.immgen.org/cutrun/index... #CUT&RUN #histone #post-transcriptional #immunesystem
February 18, 2025 at 6:31 PM
Check out the new ImmGen forum! immgen.wixsite.com/immgenforum/... It’s now easy to share ideas, look up answers to FAQs, or ask questions to the ImmGen team or the community of ImmGen data users. #Immgen #forum #discussion
February 18, 2025 at 6:25 PM