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just a little genome browser
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jbrowse.org
Excited to share this demo of using AlphaGenome in JBrowse 2!
screenshot showing AlphaGenome prediction tracks in JBrowse, closely following the TAL1 tutorial from https://www.alphagenomedocs.com/colabs/example_analysis_workflow.html
jbrowse.org
JBrowse v3.3.0 is released, featuring a big update: multi-sample SV visualization!

Users can now see complex patterns of structural variation from multi-sample VCF files, with detailed mouseover information and genotype frequencies in the sidebar

Release notes: jbrowse.org/jb2/blog/202...
jbrowse.org
I know it is a bit late, but we finally got around to writing our 2024 year-in-review! jbrowse.org/jb2/blog/202...

Let us know what you think!
Reposted
ianholmes.org
Trying a little experiment. Here is a GPT instructed to be a JBrowse/Apollo coach. Can help you set things up, write custom plugins, debug etc. Might try adding to it as time goes on @jbrowse.org @apollo.jbrowse.org chatgpt.com/g/g-67a5718f...
ChatGPT - JBrowse
Expert in JBrowse 2, Apollo 3, GMOD tools, and genome annotation.
chatgpt.com
jbrowse.org
We are pleased to announce JBrowse v3.0.0! This is the latest semver bump to our JBrowse 2 product line

For this release, we created new features for phased and polyploid VCFs. The new phased mode in particular can reveal interesting patterns of inheritance in trio VCFs

jbrowse.org/jb2/blog/202...