Karl Schmid
@kjschmid.bsky.social
1.4K followers 1K following 100 posts
Professor of Crop Diversity and Breeding Informatics, University of Hohenheim, Stuttgart, Germany Website: https://evoplant.uni-hohenheim.de Mastodon: https://fediscience.org/@kjschmid Opinions are my own.
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kjschmid.bsky.social
New preprint led by our bioinformatician Mireia Vidal Villarejo on the demography of a maize fungal pathogen in Switzerland 🇨🇭.

Main finding: In a multiyear survey we observed a rapid replacement of established by exotic, tropical genetic lineages of the pathogen.

www.biorxiv.org/content/10.1...
Figure of from research paper showing the dynamics of maize pathogen straints over time (years)
Reposted by Karl Schmid
elvirarosert.bsky.social
Ich schlage zusätzlich zu allen genannten zwei weitere Verbote vor:

Kalter Hund (kein Hund; stattdessen: Butterkekse in fester Schokomasse)

Russisch Brot (nicht russisch und auch kein Brot; stattdessen: Kakao-Eiweiß-Gebäck in Buchstabenform).
kjschmid.bsky.social
The Cluster of Excellence @greenrobust.de is hiring:

- Computer Scientist/Research data manager: shorturl.at/xSvvO
- Data steward: shorturl.at/l6NCv
- Scientific coordinator 'Plant Perturbation Atlas': shorturl.at/vBU6x

Deadline: Friday, 7 November 2025

RT are welcome

#plantjobs #plantscijobs
Stellenangebote: Universität Hohenheim
Aktuelle Stellenangebote der Universität Hohenheim.
www.uni-hohenheim.de
kjschmid.bsky.social
Good thread 🧵👇🏼
kevinjkircher.com
Sometimes I think about how from 1935-1975ish, Bell Labs produced an insane amount of revolutionary science and technology, including 11 Nobel Prizes, the transistor, UNIX, C, the laser, the solar cell, information theory, etc. The secret? Provide scientists with ample, steady, no-strings funding.
sites.stat.columbia.edu
Reposted by Karl Schmid
tanjaslotte.bsky.social
*Postdoc in Evolutionary genomics at Stockholm University*
We are recruiting a postdoc for a large interdisciplinary project to investigate evolutionary drivers and genomic consequences of pollen evolution in response to pollination mode shifts in flowering plants. 1/5

su.varbi.com/what:job/job...
Purple pollen visible in a dissected flower of Linum grandiflorum, flowering flax, an insect-pollinated species.
kjschmid.bsky.social
Would you mind letting us know which book it is? Would love to read it!
Reposted by Karl Schmid
gaelvaroquaux.bsky.social
Normative framework of bigger tech

(aka, me trolling the tech audience)
gaelvaroquaux.bsky.social
Come to my lightning talk
At @pydataparis.bsky.social in a few minutes
Reposted by Karl Schmid
popgroup2026.bsky.social
Exciting news!
The next #PopGroup meeting will take place in Lille 🍟, France, 7–9 January 2026 – just 1 hour by train from London, Brussels, and Paris.

This year, PopGroup will also host ALPHY, the annual meeting of Evolutionary Genomics.

More info: populationgeneticsgroup.org.uk

See you there !
Population Genetics group 59
populationgeneticsgroup.org.uk
Reposted by Karl Schmid
geminiteamlab.bsky.social
📢 A Junior Professorship (W1, tenure track) is open at the Center for Plant Molecular Biology at Uni Tübingen (@zmbp-tuebingen.bsky.social) — to work on plant protein biochemistry (composition, structure, dynamics, or regulation of protein complexes). 🌱 Great opportunity — Apply by Oct 17th!
kjschmid.bsky.social
PhD student: Professor, why are you still using LaTeX? It seems only boomers mess with that.

Professor: Well, my days are full of admin. When a recommendation letter I write for you in LaTeX compiles on the first try, I get a burst of instant gratification that keeps me going.

PhD student: 🙄
Reposted by Karl Schmid
matthewcobb.bsky.social
And here we are. Another damn’d thick, square book. A real wrist-sprainer. UK edition (pictured) has endpapers showing Crick and Brenner’s blackboard and colour plates. Both U.K. and US editions have sections heralded by a double page photo as here. Loads of illustrations. Out in November!
Cover and spine of CRICK, my biography of Francis Crick Endpapers and inside flap of book Double page photo of Crick at blackboard with section title The Central Problem Colour plate showing Crick at Cold Spring Harbor in 1954.
Reposted by Karl Schmid
hochholdingerf.bsky.social
Our paper by Marion Pitz and Jutta Baldauf on the regulation of gene expression complementation in maize hybrids has now been published in Genome Biology. 1/7
genomebiology.biomedcentral.com/articles/10....
Regulation of heterosis-associated gene expression complementation in maize hybrids - Genome Biology
Background Classical genetic concepts to explain heterosis attribute the superiority of F1-hybrids over their homozygous parents to the complementation of unfavorable by beneficial alleles (dominance) or to heterozygote advantage (overdominance). Here we analyze 112 intermated B73xMo17 recombinant inbred lines of maize and their backcrosses to their original parents B73 and Mo17 to obtain hybrids with an average heterozygosity of ~ 50%. This genetic architecture allows studying the influence of homozygous and heterozygous genomic regions on gene expression in hybrids. Results We demonstrate that single parent expression (SPE) complementation explains between − 8% and 29% of the mid-parent heterotic variance in these hybrids. In this expression pattern, consistent with dominance, genes are active in only one parent and in the hybrid, thus increasing the number of expressed genes in hybrids. Furthermore, we establish that eQTL regulating SPE genes are predominantly located in heterozygous regions of the genome. Finally, we identify an SPE gene that regulates lateral root density in hybrids. Remarkably, the activity of this gene depends on the presence of a Mo17 allele in an eQTL that regulates this gene. Conclusions Here we show that dominance of SPE genes influences the number of active genes in hybrids, while heterozygosity is instrumental for the regulation of these genes. This finding supports the notion that the genetic constitution of distant regulatory elements is instrumental for the activity of heterosis-associated genes. In summary, our results connect genetic variation at regulatory loci and the degree of heterozygosity with phenotypic variation of heterosis via SPE complementation.
genomebiology.biomedcentral.com
Reposted by Karl Schmid
robertfinger.bsky.social
Mischen für langfristig mehr Ertrag

Saatgutmischungen werden zunehmend in Schweizer und europäischer Weizenproduktion eingesetzt. Artikel in der Bauernzeitung
Reposted by Karl Schmid
bossdorf.bsky.social
Job Alert! We're hiring a BIOINFORMATICIAN / NGS SPECIALIST to support our new Molecular Biodiversity Lab in the @terra-cluster.org at @unituebingen.bsky.social. Like the idea to use your skills for understanding biodiversity? To work on diverse questions in a wonderful place? Apply!
Please repost!
Reposted by Karl Schmid
zmbp-tuebingen.bsky.social
📢 Job alert! #PlantSciJob
We are opening a Professorship (W1-TT) in Plant Biochemistry at the ZMBP @unituebingen.bsky.social
Apply by October 17th

Please spread the word!

More info 👇
uni-tuebingen.de/fakultaeten/...
Open Professorship (W1-TT) at the ZMBP, University of Tübingen (Germany). Deadline October 17th. More info: https://uni-tuebingen.de/fakultaeten/mathematisch-naturwissenschaftliche-fakultaet/fachbereiche/zentren/zentrum-fuer-molekularbiologie-der-pflanzen/zmbp/job-opportunities/#c12494
Reposted by Karl Schmid
greenrobust.de
Green and Robust: our first mini booth at the public day of the Heidelberg Botanical Garden. www.botgart.cos.uni-heidelberg.de/de
kjschmid.bsky.social
Der Blick auf die PV-App macht eigentlich durchwegs große Freude.

Es ist immer wieder interessant, mit Nachbarn und Freunden zu diskutieren, die noch keine PV auf dem Dach haben, und sich ihre Argumente anzuhören (Fehlende €€ sind es nicht...)
kjschmid.bsky.social
#KI will ich im Job nicht mehr missen.

Aber diesen Sommer waren wir auf einer Reise mit langen Offlinephasen. Ich hatte nur ein leeres Notizbuch mit Kuli und ein iPad als Handbibliothek dabei. Es hat so viel Spaß gemacht, die im Alltag zurückgestellten Ideen in Ruhe und mit Muße aufzuschreiben!
Reposted by Karl Schmid
rmcelreath.bsky.social
Lots of unrealized value in researchers using packages like this to structure and manage projects. We need to integrate with causal inference and calibration/testing tools, so that stat models can be derived in pipeline from questions and mechanistic models, and then tested on synthetic data.
Reposted by Karl Schmid