Lee Katz
lskatz.github.io
Lee Katz
@lskatz.github.io
Co host of the Micro Binfie podcast
Reposted by Lee Katz
Just a couple shots protect you from having to bury your child.

THIS ISN’T HARD. VACCINATE!
High school student suddenly dies from bacterial meningitis: School district
YouTube video by ABC News
youtu.be
January 5, 2026 at 8:42 PM
I thought we collectively decided that gene drive was too permanent and uncontrollable to implement? As in, it would be too difficult to contain in one location.
December 24, 2025 at 10:58 AM
(A central database such as NCBI Pathogens certainly helps though!)

Reminding the world about Mashpit 🤘 joss.theoj.org/papers/10.21...
Mashpit: sketching out genomic epidemiology
Xu et al., (2024). Mashpit: sketching out genomic epidemiology. Journal of Open Source Software, 9(104), 7306, https://doi.org/10.21105/joss.07306
joss.theoj.org
November 13, 2025 at 2:21 AM
I strongly believe in PulseNet for genomic epidemiology, but if industry wants a semi anonymous genomic epidemiology platform (but less effective than PulseNet), we developed one at UGA. It fits on a raspberry pi and lets partners share encoded genomes without a central database.
November 13, 2025 at 2:21 AM