OmicsPred
@omicspred.bsky.social
56 followers 6 following 9 posts
A resource to enhance the accessibility and usability of genetic scores for multi-omic traits and their phenotypic associations www.omicspred.org
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omicspred.bsky.social
We're working closely with our PredictDB colleagues to bring you an integrated resource for multi-omic predictors

We're happy to announce that PrediXcan GTExV8 expression predictors are now annotated and openly available via OmicsPred! www.omicspred.org

More info www.omicspred.org/publication/...
OmicsPred is an atlas of genetic scores for prediction of multi-omics data.
www.omicspred.org
omicspred.bsky.social
OmicsPred is developed by @laurentgil33.bsky.social @yuxu.bsky.social @iamslambert.bsky.social @mikeinouye.bsky.social with support from @uniofcam.bsky.social, HDRUK, @ebi.embl.org and the Baker Institute. Many thanks also to @hakyim.bsky.social, Ruidong Xiang, many others! (8/N)
omicspred.bsky.social
We encourage users to contribute newly developed multi-omic genetic scores, fresh evaluations of existing scores, and new association results from additional cohorts. Sharing helps the community maximize utility and accessibility of these scores! Submit your scores: forms.gle/KLZGbvurrftF... (7/N)
omicspred.bsky.social
Currently, we've curated scores from our flagship paper (doi.org/10.1038/s415...), along with recently developed scores for ~3000 Olink proteomic traits from the UKB PPP (preprint incoming). We are collaborating with & curating cognate resources in the community for our next update. Stay tuned!(6/N)
An atlas of genetic scores to predict multi-omic traits - Nature
A machine learning approach is used to analyse multi-omics (proteomics, metabolomics and transcriptomics) data, producing genetic scores for more than 17,000 biomolecular traits in human blood, a...
doi.org
omicspred.bsky.social
We provide REST APIs to allow users to search and retrieve all OmicsPred metadata, offering flexibility to identify scores, associations, or other entities that meet their specific needs. (5/N)
omicspred.bsky.social
You can also browse and search for omic trait-phenotype associations identified in the biobank association analyses using the genetically predicted multi-omic traits. (4/N)
omicspred.bsky.social
Each score has its own page describing the omic trait a score predicts, its linked biological annotations, how the score was developed, samples used for training/testing (with ancestry information) and related performances, and a link to download the score model. (3/N)
omicspred.bsky.social
On OmicsPred, you can browse and search for multi-omic genetic scores (www.omicspred.org/scores), related publications, omics platforms, and the biological pathways associated with these scores. (2/N)
omicspred.bsky.social
Introducing a major upgrade to OmicsPred platform (www.omicspred.org) — a resource to enhance the accessibility and usability of genetic scores for multi-omic traits and their phenotypic associations. (1/N)