Papalopulu Lab
@papalopululab.bsky.social
87 followers 86 following 13 posts
Interested in how changes in gene expression dynamics underlie cell state transitions in development and cancer. Our team is led by Prof Nancy Papalopulu and we are based at the University of Manchester.
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papalopululab.bsky.social
Check out the Perspective piece by our colleague @anzymiller.bsky.social and other fellows on the Pathway to Independence programme!
papalopululab.bsky.social
This exciting study led by @anzymiller.bsky.social is now published! NGN3 oscillations control the timing of differentiation during pancreas development through a fold-change sensitive gene regulatory motif. Congratulations to all authors!
anzymiller.bsky.social
I’m really pleased to share that our paper is out in Developmental Cell! NGN3 oscillates in the developing pancreas and controls the timing of cell differentiation via an incoherent feed-forward motif. For more details check out the comments below and DOI: 10.1016/j.devcel.2025.06.004
papalopululab.bsky.social
Overall, our exploration of HES1 and HES5 in the same cell suggests that a co-expressing hybrid state is enabled by oscillatory dynamics and synchronisation at single cell level.
papalopululab.bsky.social
Using in vivo data, we show that the fraction of neural progenitor cells that co-express HES1 and HES5 becomes reduced between E9.5 and E10.5. This is supported by analysis of existing transcriptomics data showing that progenitors are exiting the hybrid state during development.
papalopululab.bsky.social
In the coupled model, the resolution of the cross-repressive motif into a single dominant HES occurs through a change in cross-repression threshold and/or level; this suggests that a similar process could occur during development to give rise to separate HES1 and HES5 expression domains.
papalopululab.bsky.social
Using a computational model of HES protein repressing mRNA, we find that differences in protein stability give them distinct free-running oscillatory periods, but co-expression results in phase-locking, with slower HES5 entraining faster HES1.
papalopululab.bsky.social
Using in-vitro neural progenitor cultures and timelapse imaging, we show that most cells are in a hybrid HES1/HES5 state characterised by co-oscillation at a common 3-4h period. At the same time, a minority of progenitors show resolution of the hybrid state into one dominant HES.
Reposted by Papalopulu Lab
biologists.bsky.social
We are also highlighting John Gurdon, 2012 Nobel laureate in Physiology or Medicine and former Chair of the Board of Directors at @biologists.bsky.social, as an extraordinary biologist. #100biologists
The Company of Biologists 100 logo to the left and QR code to the right.
 
Portrait of John Gurdon to the left, text to the right
 
100 extraordinary biologists

John Gurdon

John Gurdon was Chair of the Board of Directors from 2001 to 2011. He published many articles in Development, including some of the work that led to his 2012 Nobel Prize for cloning amphibians by nuclear transfer.

#100biologists #biologists100
Reposted by Papalopulu Lab
physicsoflifeuk.bsky.social
We're excited to host two fantastic speakers at our next online @physicsoflifeuk.bsky.social ECR Seminar on Tuesday 15 April, 2–3 PM BST:
Tisma Milos and Thomas McLean
chaired by @veronicabiga.bsky.social

Please register below for the Zoom link:
lnkd.in/dSynrAe8
Reposted by Papalopulu Lab
biologists.bsky.social
We are highlighting Kate Storey, who served as a Director at @biologists.bsky.social from 2007 to 2022 and co-founded the Company’s Workshop programme, as an extraordinary biologist. #100biologists
The Company of Biologists 100 logo to the left and QR code to the right.
 
Portrait of Kate Storey to the left, text to the right
 
100 extraordinary biologists

Kate Storey

Kate Storey served as a Director from 2007 to 2022. She initiated the Company's Workshops programme and co-organised the first Workshop. Kate also co-initiated the Company's support for Sustainable Conferencing. Kate's lab researches nervous system development at the University of Dundee, UK.

#100biologists #biologists100
papalopululab.bsky.social
We just joined Bluesky and we're hoping to connect with fellow scientists interested in quantitative and developmental biology! Follow us for future updates! Logo credit goes to @golgigraphics.bsky.social