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Peer Community Journal @peercomjournal.bsky.social · 17h

Now published in Peer Community Journal, #evolutionarybiology section:
Comparative genomics of Rickettsiella bacteria reveal variable metabolic pathways potentially involved in symbiotic interactions with arthropods
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Comparative genomics of Rickettsiella bacteria reveal variable metabolic pathways potentially involved in symbiotic interactions with arthropods

Floriano, Anna M.1 ; El-Filali, Adil1 ; Amoros, Julien2 ; Buysse, Marie2 ; Jourdan-Pineau, Hélène3, 4 ; Sprong, Hein5 ; Kohl, Robert5; Dirks, Ron P.6 ; Schaap, Peter7, 8 ; Koehorst, Jasper7, 8 ;…

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Peer Community Journal @peercomjournal.bsky.social · 2d

Now published in Peer Community Journal, #infections section: Data mining of public genomic repositories: harnessing off-target reads to expand microbial pathogen genomic resources

Data mining of public genomic repositories: harnessing off-target reads to expand microbial pathogen genomic resources

Richard, Damien1 ; Poulicard, Nils1 1 PHIM Plant Health Institute, Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Montpellier, France

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Peer Community Journal @peercomjournal.bsky.social · 5d

Now published in Peer Community Journal, #infections section: Disease severity in coinfected hosts: the importance of infection order

Disease severity in coinfected hosts: the importance of infection order

Dusuel, Aloïs1, 2; Bourbon, Luc3; Groetz, Emma1, 2; Pernet, Nicolas4; Rialland, Mickaël1, 2; Roche, Benjamin5, 6; Faivre, Bruno3; Sorci, Gabriele3 1 CTM - Center for Translational and Molecular…

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Peer Community Journal @peercomjournal.bsky.social · 5d

Now published in Peer Community Journal, #infections section: Population shifts in begomoviruses associated with tomato yellow leaf curl disease in western Mediterranean countries

Population shifts in begomoviruses associated with tomato yellow leaf curl disease in western Mediterranean countries

Granier, Martine1, 2 ; Faize, Mohamed3 ; Passera, Sandie4; Urbino, Cica1, 2 ; Peterschmitt, Michel1, 2 1 CIRAD, UMR PHIM, F-34398 Montpellier, France 2 PHIM, Univ Montpellier, CIRAD, INRAE, Institut…

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Peer Community Journal @peercomjournal.bsky.social · 8d

Now published in Peer Community Journal, #genomics section: hdmax2, an R package to perform high dimension mediation analysis

hdmax2, an R package to perform high dimension mediation analysis

Pittion, Florence1 ; Jumentier, Basile2; Nakamura, Aurélie3 ; Lepeule, Johanna3 ; François, Olivier1, 4 ; Richard, Magali1, 4 1 Translational Innovation in Medicine and Complexity / Recherche…

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Peer Community Journal @peercomjournal.bsky.social · 9d

Last Friday, we published the 500th article of Peer Community Journal! 🥳

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Peer Community Journal @peercomjournal.bsky.social · 12d

Now published in Peer Community Journal, #genomics section: HaploCharmer: a Snakemake workflow for read-scale haplotype calling adapted to polyploids

HaploCharmer: a Snakemake workflow for read-scale haplotype calling adapted to polyploids

Rio, Simon1, 2 ; Abdallah, Sophie1, 2 ; Durand, Théo1, 2; D'Hont, Angélique1, 2 ; Garsmeur, Olivier1, 2 1 CIRAD, UMR AGAP Institut, F-34398 Montpellier, France 2 UMR AGAP Institut, Univ Montpellier,…

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Peer Community Journal @peercomjournal.bsky.social · 13d

Now published in Peer Community Journal, #infections section: The potential of attractive insecticide-treated nets (ITNs) in reducing malaria transmission: a modeling study

The potential of attractive insecticide-treated nets (ITNs) in reducing malaria transmission: a modeling study

Moiroux, Nicolas1, 2 ; Pennetier, Cédric1 1 MIVEGEC, IRD, CNRS, Univ. Montpellier - Montpellier, France 2 Pôle de Zoologie Médicale, Institut Pasteur Dakar - Dakar, Sénégal

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Peer Community Journal @peercomjournal.bsky.social · 13d

Now published in Peer Community Journal, #animalscience section:
Individual or collective treatments: how to target antimicrobial use to limit the spread of Mannheimia haemolytica among beef cattle?

Individual or collective treatments: how to target antimicrobial use to limit the spread of Mannheimia haemolytica among beef cattle?

Sorin-Dupont, Baptiste1 ; Poyard, Antoine 1; Assié, Sebastien1 ; Picault, Sebastien 1 ; Ezanno, Pauline1 1 Oniris, INRAE, BIOEPAR, 44300, Nantes, France

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Peer Community Journal @peercomjournal.bsky.social · 14d

Now published in Peer Community Journal, #ecology section: The value of local allometries from airborne laser scanning for tropical forest biomass estimates

The value of local allometries from airborne laser scanning for tropical forest biomass estimates

Huertas, Claudia1 ; Fischer, Fabian Jörg 2 ; Aubry-Kientz, Mélaine1 ; Ball, James3 ; Derroire, Géraldine4 ; Vincent, Grégoire1 1 AMAP, Univ Montpellier, CIRAD, CNRS, INRAE, IRD, Montpellier,…

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Peer Community Journal @peercomjournal.bsky.social · 16d

Now published in Peer Community Journal, #ecology section: A novel quantile regression approach to define optimal ecological niche: a case study on habitat suitability of cockle populations (Cerastoderma edule)

A novel quantile regression approach to define optimal ecological niche: a case study on habitat suitability of cockle populations (Cerastoderma edule)

Lehuen, Amélie1, 2 ; Dancie, Chloé3; Grasso, Florent4 ; Smolders, Sven5; Cozzoli, Francesco6, 7 ; Orvain, Francis1, 2 1 Marine Ecosystems and oRganisms reSEArch Lab, Esplanade de la Paix – CS 14032…

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Peer Community Journal @peercomjournal.bsky.social · 19d

Now published in Peer Community Journal, #ecology section: A Julia toolkit for species distribution data

A Julia toolkit for species distribution data

Poisot, Timothée1 ; Bussières-Fournel, Ariane1; Dansereau, Gabriel1 ; Catchen, Michael D.1 1 Université de Montréal, Département de Sciences Biologiques, Montréal QC, Canada

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Peer Community Journal @peercomjournal.bsky.social · 20d

Now published in Peer Community Journal, #Microbiology section: EnVhogDB: an extended view of the viral protein families on Earth through a vast collection of HMM profiles
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EnVhogDB: an extended view of the viral protein families on Earth through a vast collection of HMM profiles

Rubén, Pérez-Bucio1, 2; Enault, François1 ; Galiez, Clovis2 1 Université Clermont Auvergne, CNRS, LMGE, F-63000 Clermont-Ferrand, France 2 Univ. Grenoble Alpes, CNRS, Grenoble INP, LJK, 38000…

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Peer Community Journal @peercomjournal.bsky.social · 21d

Now published in Peer Community Journal, first article of the new #nutrition section: Sustainable diets: Links between knowledge, motivations and eating practices

Sustainable diets: Links between knowledge, motivations and eating practices.

Chene, Oriane1 ; Chambaron, Stéphanie1 ; Arvisenet, Gaëlle1 ; Dujourdy, Laurence2, 3 1 Université Bourgogne Europe, Institut Agro, CNRS, INRAE, UMR CSGA, 21000 Dijon, France 2 Institut Agro Dijon,…

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Peer Community Journal @peercomjournal.bsky.social · 22d

Now published in Peer Community Journal, #ecology section: Long term trend and short-term dynamics of a willow ptarmigan population

Long term trend and short-term dynamics of a willow ptarmigan population

Willebrand, Tomas1 ; Hörnell-Willebrand, Maria1 ; Brittas, Rolf2; Kleiven, Eivind Flittie3 1 Department of Forestry and Wildlife Management, Faculty of Applied Ecology and Agricultural Sciences,…

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Peer Community Journal @peercomjournal.bsky.social · 26d

Now published in Peer Community Journal, #evolutionarybiology section: Population structure and genetic diversity of the Critically Endangered bowmouth guitarfish (Rhina ancylostomus) in the Northwest Indian Ocean

Population structure and genetic diversity of the Critically Endangered bowmouth guitarfish (Rhina ancylostomus) in the Northwest Indian Ocean

Kipperman, Marja J.1 ; Jabado, Rima W.2, 3 ; Haque, Alifa Bintha4, 5 ; Fernando, Daniel6 ; Anjani, P.A.D.L6; Spaet, Julia L.Y.7 ; Humble, Emily1 1 Royal (Dick) School of Veterinary Studies and the…

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Peer Community Journal @peercomjournal.bsky.social · 27d

Now published in Peer Community Journal, #evolutionarybiology section: Integrating ethnolinguistic and archaeobotanical data to uncover the origin and dispersal of cultivated sorghum in Africa: a genomic perspective

Integrating ethnolinguistic and archaeobotanical data to uncover the origin and dispersal of cultivated sorghum in Africa: a genomic perspective

Gilabert, Aude1, 2 ; Deu, Monique1, 2 ; Champion, Louis3 ; Cubry, Philippe3 ; Donkpegan, Armel1, 2, 4 ; Rami, Jean-Francois1, 2; Pot, David1, 2 ; Vigouroux, Yves3 ; Leclerc, Christian1, 2 1 CIRAD,…

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Peer Community Journal @peercomjournal.bsky.social · 27d

Now published in Peer Community Journal, #ecology section: Scales of marine endemism in oceanic islands and the Provincial-Island endemism

Scales of marine endemism in oceanic islands and the Provincial-Island endemism

Pinheiro, Hudson T.1 ; Rocha, Luiz A.2 ; Quimbayo, Juan P.3 1 Center for Marine Biology, University of São Paulo, São Sebastião, SP, Brazil 2 California Academy of Sciences, San Francisco, CA, USA 3…

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Peer Community Journal @peercomjournal.bsky.social · 28d

Now published in Peer Community Journal, #evolutionarybiology section: Performance evaluation of adaptive introgression classification methods

Performance evaluation of adaptive introgression classification methods

Romieu, Jules1 ; Camarata, Ghislain1, 2; Crochet, Pierre-André3 ; de Navascués, Miguel2 ; Leblois, Raphaël2 ; Rousset, François1 1 ISEM, Univ Montpellier, CNRS, IRD, Montpellier, France 2 CBGP,…

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Peer Community Journal @peercomjournal.bsky.social · 28d

Now published in Peer Community Journal, #paleontology section: Archaeological Bone Assemblages Trace Changes in Turtle and Tortoise Diversity in Continental Southeast Asia

Archaeological Bone Assemblages Trace Changes in Turtle and Tortoise Diversity in Continental Southeast Asia

Bochaton, Corentin1 ; Naksri, Wilailuck2; Chantasri, Sirikanya1, 3 ; Maneechote, Melada4; Mithong, Supalak1; Heng, Sophady5; Forestier, Hubert6; Auetrakulvit, Prasit4; Zeitoun, Valéry7;…

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Peer Community Journal @peercomjournal.bsky.social · Sep 4

Now published in Peer Community Journal, #zoology section: Revisiting the systematics of Brevipalpus flat mites (Tenuipalpidae): phylogeny, species groups and cryptic diversity

Revisiting the systematics of Brevipalpus flat mites (Tenuipalpidae): phylogeny, species groups and cryptic diversity

de Mendonça, Renata Santos1, 2 ; Ferragut, Francisco3 ; de Oliveira, Isis Carolina S.2, 4 ; Tassi, Aline Daniele5, 6 ; Fileni, Felipe7 ; Ochoa, Ronald8 ; Navia, Denise9 1 CAPES/PNPD - Faculdade de…

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Peer Community Journal @peercomjournal.bsky.social · Aug 29

Now published in Peer Community Journal, #Health and #Movement Sciences section: Cigarette smoke exposure as a potential risk factor for sleep problems in pregnant women

Cigarette smoke exposure as a potential risk factor for sleep problems in pregnant women

Ciochoń, Aleksandra1, 2, 3 ; Balwicki, Łukasz 4 ; Klimek, Magdalena 2 ; Danel, Dariusz P.5 ; Apanasewicz, Anna 5 ; Ziomkiewicz, Anna 6 ; Galbarczyk, Andrzej2, 7; Marcinkowska, Urszula M. 2 1…

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Peer Community Journal @peercomjournal.bsky.social · Aug 28

Now published in Peer Community Journal, #paleontology section: Evolutionary assembly of crown reptile anatomy clarified by late Paleozoic relatives of Neodiapsida
peercommunityjournal.org/articles/10....

Evolutionary assembly of crown reptile anatomy clarified by late Paleozoic relatives of Neodiapsida

Jenkins, Xavier A1, 2, 3 ; Benson, Roger BJ1, 4 ; Ford, David P5, 4; Browning, Claire6; Fernandez, Vincent7, 4; Dollman, Kathleen7, 4; Gomes, Timothy2; Griffiths, Elizabeth8; Choiniere, Jonah N4 ;…

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Peer Community Journal @peercomjournal.bsky.social · Aug 22

Now published in Peer Community Journal, #archaeology section:
Applying statistical and causal modeling to interpret thermal alteration in observational lithic data

Applying statistical and causal modeling to interpret thermal alteration in observational lithic data

Cardillo, Marcelo1 ; Carranza, Eugenia1 1 Instituto Multidisciplinario de Historia y Ciencias Humanas, Consejo Nacional de Investigaciones Científicas y Técnicas (IMHICIHU, CONICET) / Facultad de…

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Peer Community Journal @peercomjournal.bsky.social · Aug 22

Now published in Peer Community Journal, section Mathematical &
#ComputationalBiology: Reaction cleaving and complex-balanced distributions for chemical reaction networks with general kinetics

Reaction cleaving and complex-balanced distributions for chemical reaction networks with general kinetics

Hoessly, Linard1; Wiuf, Carsten2 ; Xia, Panqiu3 1 Data Center of the Swiss Transplant Cohort Study, University hospital Basel, Switzerland 2 Department of Mathematical Sciences, University of…

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