Peter Rupprecht
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ptrrupprecht.bsky.social
Peter Rupprecht
@ptrrupprecht.bsky.social
Junior group leader in neuroscience - calcium imaging, ephys, plasticity, microscopy, neurons & astrocytes, data analysis. PhD with Rainer Friedrich, postdoc with Fritjof Helmchen. https://www.gcamp6f.com/
What I meant is that a smart PDF reader could generate/guess the abbreviations, without any need to hard-code them for each instance of an abbreviation.
January 16, 2026 at 10:53 PM
Great idea, but works only with LaTeX. Maybe best to implement it via the *PDF reader*, not the PDF. Some browser addons for reading PDFs do this already by linking figure refs and citations (chromewebstore.google.com/detail/googl...)
Adding the same feature for abbreviations should be feasible.
Google Scholar PDF Reader - Chrome Web Store
Supercharge your paper reading: follow references, skim outline, jump to figures, cite and save.
chromewebstore.google.com
January 16, 2026 at 10:40 PM
That's a very interesting approach! What happens if you select the 10-20 best quadruplet rules and select neurons/synapses randomly from these rules? Wouldn't this diversity make the network/neuron more stable and capable? Curious about your take.
January 15, 2026 at 12:47 PM
But from a scientific perspective, your approach (modeling first, then data analysis) seems absolutely valid to me!
January 12, 2026 at 2:26 PM
In a paper, mixing modeling, data analysis and experiments may be more difficult to browse and follow for the average reader. In systems neuroscience, we are used to seeing first the data analysis and then - in the final figure - a model (which can be ignored by those who don't understand it).
January 12, 2026 at 2:25 PM
What would it really mean to achieve experimental goals that currently seem out of reach: a new blog post.

Part III - Simultaneously recording from all neurons of the human brain
gcamp6f.com/2026/01/03/a...
Annual report of my intuition about the brain (2025, part III)
How does the brain work, and how can we understand it? To approach this big question from a broad perspective, I want to report on some ideas about the brain that marked me most over the …
gcamp6f.com
January 6, 2026 at 5:49 PM
What would it really mean to achieve experimental goals that currently seem out of reach: a new blog post.

Part II - Recording the inputs and the output of a single neuron in real time in vivo
gcamp6f.com/2025/12/30/a...
Annual report of my intuition about the brain (2025, part III)
How does the brain work, and how can we understand it? To approach this big question from a broad perspective, I want to report on some ideas about the brain that marked me most over the …
gcamp6f.com
January 6, 2026 at 5:47 PM
All the work by @colah.bsky.social (blog posts, distill etc.) is amazing - clear and transparent, with little or no jargon, trying to address the hard problems head-on.
December 16, 2025 at 11:50 AM
But I believe that post-publication reviews, or the suggestions that you've made, or simply transparent open reviews, which is used by many journals already, are a good way to read papers better and more efficiently. And this is a culture change that has already taken place during the last decade...
November 21, 2025 at 10:39 AM
I don't think there is a way around properly reading the literature. How could we design science experiments, if the knowledge that we need for their design is somewhere in a database or LLM, but not in our heads?
November 21, 2025 at 10:38 AM
Good point! But already now, everybody can contribute to post-publication peer review right now, no need for a centralized structure. I regularly write such reviews on my blog: gcamp6f.com/category/rev...
The idea is not new, see the "peeriodicals" by Romain Brette:
peeriodicals.com/peeriodicals...
Peeriodicals
Theory of spike initiation, sensory systems, autonomous behavior, epistemology
peeriodicals.com
November 20, 2025 at 8:59 PM
If you don't learn how to write, then you don't learn how to think.
November 15, 2025 at 3:52 PM
Looks like a 1:1 copy of the Cambridge Technology 8 kHz scanner. Did you notice any differences? Or have they simply licensed the technology from the existing scanner?
October 22, 2025 at 7:58 PM
It's a great paper - congrats!
October 3, 2025 at 8:25 PM
This objective was designed for 2P imaging. For 1P imaging, I believe that there are still some technical problems to be solved. Perhaps @voigtvision.bsky.social or @nvladimus.bsky.social can tell you more!
September 29, 2025 at 9:15 AM
I'm using it mostly for 2P imaging, but it should also be relevant for expansion microscopy: Olympus XLPLN10XSVMP with NA 0.6, WD 8 mm: evidentscientific.com/en/objective...
Objective Finder | Evident Scientific | Olympus
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evidentscientific.com
September 28, 2025 at 6:22 PM