Jose Miguel Ramirez
@ramirezjmiguel.bsky.social
54 followers 99 following 4 posts
PhD in Bioinformatics | Transcriptomics, Genetics, Epigenetics and Data Science
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Reposted by Jose Miguel Ramirez
beatrizurda.bsky.social
1/ Everything that could go wrong in paper publishing… did.
A story of patience, absurdity, and persistence 🌀 <1min

From Alfonso Valencia’s lab and a very stubborn PhD student (me).
Reposted by Jose Miguel Ramirez
bsc-cns.bsky.social
🔴Nuevo estudio del BSC y @Universidade do Porto revela que fumar 🚬 imita y acelera el envejecimiento en muchos tejidos del cuerpo humano

⭕Se trata del 1r análisis exhaustivo y multitejido que demuestra que el tabaquismo no sólo perjudica a órganos específicos

📄En Genome Medicine: bsc.es/Zt2
ramirezjmiguel.bsky.social
Just got back from Milan after attending #ESHG2025. I had a great time presenting our poster and seeing so much interest in our preprint on calling rDNA variants: shorturl.at/p1D0C. Huge thanks to everyone who stopped by, asked questions, and shared insights. Let’s keep the conversation going! 🧬
ramirezjmiguel.bsky.social
Check this new preprint on inter-individual DNA methylation variation, lead by the incredibly talented @oliveroswinona.bsky.social!!
oliveroswinona.bsky.social
Excited to share our new preprint: The impact of sex, age, and genetic ancestry on DNA methylation across tissues. Briefly, we explored how sex, age, and genetic ancestry shape DNA methylation across tissues and individuals. Want to know a bit more? Follow this “bluetorial”!
doi.org/10.1101/2025...
The impact of sex, age, and genetic ancestry on DNA methylation across tissues
Background: Understanding the consequences of individual DNA methylation variation is crucial for the study of human biology and disease. However, the collective impact of demographic traits on DNA me...
www.biorxiv.org
Reposted by Jose Miguel Ramirez
crg.eu
It's a beautiful spring day in Barcelona. Sunshine welcoming all our guests for the first day of the CRG's annual symposium! This year's theme is all about the mechanisms of gene expression.
ramirezjmiguel.bsky.social
Congratulations @oliveroswinona.bsky.social!!! A humongous amount of great work!! So proud and happy for you, even though you set the bar very high for the rest of us in the @melelab.bsky.social
oliveroswinona.bsky.social
Yesterday I defended my PhD thesis at the UB after nearly 5 years of work at the BSC @melelab.bsky.social. I couldn’t be happier! This wouldn’t have been possible without my amazing friends and fellow PhD students. 💘🎉
Reposted by Jose Miguel Ramirez
melelab.bsky.social
Do you work in 💫human genetics💫?
Have you ever worried about what’s inside your gene annotation GTF⁉️

WELL, YOU SHOULD! 😱
Especially when studying a genetically diverse 🌍 cohort!

🔴We discover that gene annotations are European-biased 👉 impacting downstream analyses!

Don't miss this thread🧵⬇️
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Long-read transcriptomics of a diverse human cohort reveals widespread ancestry bias in gene annotation
Accurate gene annotations are fundamental for interpreting genetic variation, cellular function, and disease mechanisms. However, current human gene annotations are largely derived from transcriptomic...
www.biorxiv.org
ramirezjmiguel.bsky.social
Thrilled to have hosted the inaugural PhD Afterwork event for the Life Sciences Department @bsc-cns.bsky.social yesterday! 🎉 Huge thanks to @aduesoba.bsky.social for being our inspiring first guest speaker. The event was a great success, and I can’t wait for the next one!