Rodrigo Cofre
@rcofre.bsky.social
240 followers 290 following 12 posts
INRIA at Université Côte d’Azur, CRONOS TEAM. Scientist broadly interested in consciousness, general anesthesia, sleep, disorders of consciousness, psychedelics, physics, mathematics, computer science, philosophy, aesthetics and arts
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Reposted by Rodrigo Cofre
rcofre.bsky.social
Hi Anton, we add a link to the repo, we did it in python with Jupyter notebooks, all in our personal computers, no need to use clusters or HPC.
rcofre.bsky.social
💊🧠 How do sleep and general anaesthesia reshape brain dynamics?

In our new paper, we bridge molecular pharmacology and whole-brain modeling using biophysically grounded simulations.

🔗 www.nature.com/articles/s43...
rcofre.bsky.social
Gentle reminder!

Deadline to apply : 5 may 2025
rcofre.bsky.social
🧠✨ How does the brain’s wiring and function shape our state of consciousness—from deep sleep to psychedelics?

We're recruiting a PhD student to explore structure-function dynamics using whole-brain modeling, fMRI, and HPC at INRIA🇫🇷

Apply now 👉 adum.fr/as/ed/voirpr...
adum.fr
rcofre.bsky.social
🧠✨ How does the brain’s wiring and function shape our state of consciousness—from deep sleep to psychedelics?

We're recruiting a PhD student to explore structure-function dynamics using whole-brain modeling, fMRI, and HPC at INRIA🇫🇷

Apply now 👉 adum.fr/as/ed/voirpr...
adum.fr
rcofre.bsky.social
🧠 New Insights in Neuroscience! 🧠

'Benchmarking macaque brain gene expression for horizontal and vertical translation'

science.org/doi/10.1126/...

Our latest study benchmarks macaque brain gene expression, revealing its potential & limitations for translational research! 🌟

Thanks Andrea Luppi!
Reposted by Rodrigo Cofre
iaciac.bsky.social
Another year, another edition!💥

Join #TopoNets25 at @netsciconf.bsky.social in Maastricht and send us your work on higher-order networks: structure, dynamics, methods, inference, software, topology, #TDA, etc.

📅 Submit by Feb 7th to give a contributed talk: sites.google.com/view/toponet...
TopoNets 2025
The complexity of many biological, social and technological systems stems from the richness of the interactions among their units. Over the past two decades, a great variety of complex systems has bee...
sites.google.com
rcofre.bsky.social
🧠 How does the brain process complex, High-Order interactions? Using fMRI and hypergraph-based methods, we uncover high-order hubs that reveal complex patterns in brain activity!

"Emergence of High-Order Functional Hubs in the Human Brain"

Read more: www.biorxiv.org/content/10.1...
Reposted by Rodrigo Cofre
r3rt0.bsky.social
New people in 🦋, the neuro/physics/maths among you may be interested in our ERC-funded postdoc positions!

Modelling brain folding development:
bsky.app/profile/r3rt...

Building a molecular/cellular/mechanical atlas of brain development: bsky.app/profile/r3rt...

DM for info, and please repost!
r3rt0.bsky.social
bsky.app/profile/r3rt...
Modelling brain morphogenesis
r3rt0.bsky.social
🚨 We’re hiring! 🚨 We're looking for a postdoc for our ERC Synergy project Unfold (unfold-lab.github.io). Join our lab at @institutpasteur to model brain morphogenesis! (1/10)
rcofre.bsky.social
🚨 THOI: Revolutionizing Higher-Order Interaction Analysis 🚨

Complex systems are more than the sum of their parts! Our latest study introduces THOI a groundbreaking Python library designed to unveil emergent collective behaviors.

Discover more: arxiv.org/pdf/2501.03381 github.com/Laouen/THOI
rcofre.bsky.social
🚀 Leveraging analytical insights & cutting-edge numerical advances, FastDMF sets a new benchmark in computational modeling! FastDMF increases the number of fitted regions by one order of magnitude, using fMRI data parcellated at 90 and 1,000 regions. direct.mit.edu/netn/article...
rcofre.bsky.social
🚀 Introducing FastDMF: A groundbreaking tool for whole-brain modeling! 🧠
🔍 Efficient, accessible implementation of the Dynamic Mean Field (DMF) model.
⚡Scaling up to 1,000 brain regions. Unlocks biophysically grounded insights into brain dynamics. Fit FC and FCD !

direct.mit.edu/netn/article...
Neural mass modeling for the masses: Democratizing access to whole-brain biophysical modeling with FastDMF
Abstract. Different whole-brain computational models have been recently developed to investigate hypotheses related to brain mechanisms. Among these, the Dynamic Mean Field (DMF) model is particularly...
direct.mit.edu
rcofre.bsky.social
Grateful to see our work featured in @psypost.bsky.social 🎉 Our study on how dynamic brain connectivity can distinguish conscious from unconscious states 🧠💡 Huge thanks to everyone involved in making this happen. Check it out here: www.psypost.org/dynamic-brai... 🙏 #Neuroscience #Consciousness
Dynamic brain connectivity distinguishes conscious and unconscious states
A fascinating new study published in Communications Biology has revealed a connection between the brain's dynamic activity and states of consciousness.
www.psypost.org