Rommie Amaro
@rommieamaro.bsky.social
4.5K followers 630 following 330 posts
Professor at UC San Diego. Computational biophysics, biology, chemistry. Multiscale modeler. Viruses. Cancer. Co-Director of the Airborne Institute.
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Reposted by Rommie Amaro
labvanni.bsky.social
Happy to share the latest from the lab, led by Daniel Alvarez, in collaboration with @lizconibear.bsky.social‬. In this AA-MD tour-de-force, we delve deep into the mechanism and energetics of lipid uptake by bridge-like lipid transfer proteins, and we learn a few interesting things along the way...
Reposted by Rommie Amaro
jeremymberg.bsky.social
Given that OMB is part of the Executive Office of the President, this should read

"after intervention by OTHER top White House Officials."
Reposted by Rommie Amaro
Reposted by Rommie Amaro
Reposted by Rommie Amaro
popstarlab.bsky.social
Did you know about the BPS Bridging Funds Program?

If you're a biophysicist navigating a difficult time, this program is for you to defray costs for attending the BPS Annual Meeting!
I am grateful to the @biophysicalsoc.bsky.social for supporting our members!
www.biophysics.org/2026meeting/...
BPS2026 Travel Awards | Biophysical Society
www.biophysics.org
Reposted by Rommie Amaro
needhibhalla.bsky.social
“Withholding or suspending these funds would jeopardize that trust and hinder progress on critical health challenges facing our nation. Ultimately, this is about finding cures and seeing them through to fruition.”

www.politico.com/news/2025/07...
14 Republican senators urge White House to release delayed NIH funds
Sen. Katie Britt (R-Ala.) is leading the letter making the ask of OMB director Russ Vought.
www.politico.com
Reposted by Rommie Amaro
brittanytrang.com
NEW from me at STAT:

We've learned that DeepMind is going to fund CASP, the protein structure competition that brought Google DeepMind's #AlphaFold to prominence (and a Nobel Prize), as its NIH funding runs out.

More @statnews.com:
www.statnews.com/2025/07/21/c...

🖥️🩺🧪🧬 #bioML
AlphaFold developer Google DeepMind to fund CASP as NIH funding falls short
Protein structure prediction contest CASP gets temporary funding from Google DeepMind as NIH grant runs out.
www.statnews.com
Reposted by Rommie Amaro
luckytran.com
BREAKING: Scientists are staging a “science fair” in the lobby of a Congressional building to tell elected officials about the critical knowledge the US will lose because their research grants have been canceled.
Reposted by Rommie Amaro
jeremymberg.bsky.social
ACTION ITEM-----ACTION ITEM

Implementation of Schedule F

This is what a lot of us have been worried about.

This allows for many civil service positions to replaced with political appointees. This could include NIH institute directors and even POs.

BUT THERE IS A COMMENT PERIOD...

1/n
the word alert is in a purple circle
ALT: the word alert is in a purple circle
media.tenor.com
rommieamaro.bsky.social
🚨. I've been mostly off social media for a bit (mental health) but this is very important!!!!!

Please comment and circulate to everyone you know for comments!!!
Reposted by Rommie Amaro
kprather.bsky.social
Reminiscing about our Airborne Institute event last week. Having @carlzimmer.com attend & sign his book Air-borne made the day beyond extra special at UC San Diego. We are ready to take on airborne disease and push beyond the place the world has been stuck for 200+ years! @rommieamaro.bsky.social
Reposted by Rommie Amaro
compoundchem.com
It's #NationalBeerDay 🍻

Enjoy some of the chemistry behind the brewing while you watch the markets slide 📉

www.compoundchem.com/2014/07/10/b...

#ChemSky 🧪
Infographic on the chemistry of beer. The top of the graphic identifies the major stages of beer brewing: milling, mashing, brewing, cooling, fermenting, and maturing. The rest of the graphic identifies four key components of beer flavour: alpha acids, beta acids, essential oils and esters. Alpha acids degrade during brewing and form iso-alpha acids, which contribute bitterness. Humulone is the main alpha acid in the majority of hops. Beta acids also originate from hops and add a harsher bitterness than alpha acids. Essential oils contribute the majority of hop flavour and aroma, and there are over 250 found in hops. Esters form during the reaction of alcohol with organic acids, and give fruity flavours.
Reposted by Rommie Amaro
dereklowe.bsky.social
More updates on what’s happening to federally funded US science. Roughly the same magic touch Trump has brought to world trade, actually.

Today’s examples are on drug-resistant gonorrhea and vaccine approvals, both of which are going to hell.
The Continuing Crisis, Part XI: Feral Children, Breaking Things
www.science.org
Reposted by Rommie Amaro
kgandersen.bsky.social
Just as our new Public Health Lab - which was built on key lessons learned during COVID - was set to open, the necessary funding for its operation was just pulled by DOGE/HHS.

That operation, critical to safety and public health in San Diego.

Gone.

www.sandiegouniontribune.com/2025/04/04/s...
San Diego to take a $40 million hit in federal funding for public health
Ninety-one grant-funded positions could be affected by cancellation of grants.
www.sandiegouniontribune.com
Reposted by Rommie Amaro
kgandersen.bsky.social
We were just notified that our contract to UCSD and Scripps Research to support wastewater surveillance in San Diego (searchcovid.info) was terminated immediately for the same reasons 👇.

That means no more genomic wastewater surveillance, and our proposed extensions to measles, Hep A, others, gone.
rommieamaro.bsky.social
This is particularly awful

The F awards are US biomedical workforce training awards

Their agenda to destroy the future of biomedical science on full display here
jeremymberg.bsky.social
F mechanisms (New and Competitive renewals)

Oof!

3/n
rommieamaro.bsky.social
Ufffff!!!!!

🤬🤬🤬🤬🤬
Reposted by Rommie Amaro
martinsteinegger.bsky.social
Run BioEmu in Colab - just click "Runtime → Run all"! Our notebook uses ColabFold to generate MSAs, BioEmu to predict trajectories, and Foldseek to cluster conformations.
Thanks @jjimenezluna.bsky.social for the help!
🌐 colab.research.google.com/github/sokry...
📄 www.biorxiv.org/content/10.1...
Google Colab
colab.research.google.com
Reposted by Rommie Amaro
craigwelch.bsky.social
Wow. California State University, UC-Berkeley, UC-Davis, UC-San Diego and U of SF are ALL urging foreign-born students, faculty and staff to reconsider international travel because there's no telling whether the Trump administration will allow them to re-enter.
www.desertsun.com/story/news/n...
Trump travel ban: California colleges urge international students to rethink travel plans
At least one university said it doesn't recommend international travel as a possible travel ban that could impact more than 40 countries looms.
www.desertsun.com
Reposted by Rommie Amaro
kityates.bsky.social
Turns out a colander works pretty well for eclipse spotting.
#SolarEclipse