rositea.bsky.social
Charles Wei
@rositea.bsky.social
81 followers 210 following 1 posts
PhD student at Cambridge | AMR | genomic surveillance | microbiome
Posts Media Videos Starter Packs
rositea.bsky.social
Charles Wei @rositea.bsky.social · Mar 2
Tired of fragmented bacterial GWAS workflows? Try BaGPipe (Bacterial GWAS Pipeline)—a fully automated, flexible Nextflow pipeline integrating Pyseer for streamlined association studies. Reproducible. Scalable. Efficient. doi.org/10.1101/2025...
#Nextflow #BacterialGWAS #AMR #Bioinformatics
BaGPipe: an automated, reproducible, and flexible pipeline for bacterial genome-wide association studies
Microbial genome-wide association study (GWAS) tools often require manual data processing steps, lack comprehensive workflows, and are limited by scalability issues, thus hindering the exploration of ...
doi.org
6 11
Reposted by Charles Wei
pducambridge.bsky.social
Pathogen Dynamics Unit @pducambridge.bsky.social · Dec 20
Hello world! After a year in the making, the Pathogen Dynamics Unit is ready to launch! Check out our website (pdu.gen.cam.ac.uk) and follow the team (bsky.app/profile/did:...) to keep up with the latest from our infectious disease supergroup based at @geneticscam.bsky.social
1 12 22