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scverse.bsky.social
scverse
@scverse.bsky.social
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Foundational tools for omics data (mostly in python).
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scverse.bsky.social
scverse @scverse.bsky.social · Aug 2
🎉 scverse conference 2025 Registration & Call for Abstracts NOW OPEN! 🎉
We're excited to announce that registration and the call for abstracts are officially open for the scverse Conference 2025!
Details in thread!
🧵 1/3
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scverse.bsky.social
scverse @scverse.bsky.social · 7h
Zoom registration link: lnkd.in/dZpbKKsY

For more information, check out the GitHub repos for LazySlide: github.com/rendeirolab/... and wsidata: github.com/rendeirolab/... , and their preprint: www.biorxiv.org/content/10.1... !
scverse.bsky.social
scverse @scverse.bsky.social · 7h
We will have our next community meeting on Tuesday, 2025-10-14 at 18:00 CEST!
Yimin Zheng will be presenting on LazySlide, a Python framework for whole slide image (WSI) analysis.
(Zoom registration link and more information in thread!)
🧵
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scverse.bsky.social
scverse @scverse.bsky.social · 8h
🗓️ scverse conference 2025 - 2 days main conference + 1 day satellite workshops

📅 November 19, 2025 | Stanford University
ℹ️ More Info: scverse.org/conference2025

🚀 Ready to join us?
📝 Register: lnkd.in/dTRydMwj
scverse.bsky.social
scverse @scverse.bsky.social · 8h
This hands-on workshop covers preprocessing pipelines, differential expression analysis, optimal target gene selection for genome-scale screening, scalable data loaders, and training ML models to predict perturbation effects. Featuring tutorials and packages from the Arc team.
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scverse.bsky.social
scverse @scverse.bsky.social · 8h
🧠 Arc Workshop at the upcoming scverse conference 2025 🧠

Processing and Modeling Large-Scale Single-Cell Perturbation Data with Machine Learning
🧵

@arcinstitute.org

#scverse2025 #PerturbSeq #MachineLearning #SingleCell #CRISPR #GenomicScreening #VirtualCells
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scverse.bsky.social
scverse @scverse.bsky.social · 1d
Thank you, CZI, for helping make #scverse2025 possible! 🙏
scverse.bsky.social
scverse @scverse.bsky.social · 1d
Join us for this exciting event:

📅 November 17-19, 2025 | Stanford University
🔬 2 days main conference + 1 day satellite workshops
🔗 Conference info: lnkd.in/dPc6sMHf
📝 Register now: lnkd.in/dTRydMwj
1
scverse.bsky.social
scverse @scverse.bsky.social · 1d
🔬 Don't miss their workshop: "Multimodal And Spatial Single Cell Data: From Data APIs to AI-driven Biological Discovery" - exploring the CZI models and data ecosystem, including CELLxGENE Census, Virtual Cells Platform, and more at CZI HQ!
1
scverse.bsky.social
scverse @scverse.bsky.social · 1d
CZI's commitment to accelerating biomedical research through open science and collaborative tools has been instrumental in advancing the single-cell community. Their support makes it possible to bring together researchers pushing the frontiers of computational biology.
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scverse.bsky.social
scverse @scverse.bsky.social · 1d
🌟 Thank You to Our Diamond Sponsor: Chan Zuckerberg Initiative! 🌟

We're thrilled to announce that the Chan Zuckerberg Initiative (CZI) is supporting scverse conference 2025 as a Diamond Sponsor! 💎

@chanzuckerberg.bsky.social
#ComputationalBiology #SingleCell #SpatialOmics #CELLxGENE
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scverse.bsky.social
scverse @scverse.bsky.social · 2d
🚀 Ready to join us?
Register: lnkd.in/dTRydMwj
ℹ️ More info: lnkd.in/dPc6sMHf

@kexinhuang.bsky.social @dr-alphalyrae.bsky.social @loicaroyer.bsky.social
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scverse.bsky.social
scverse @scverse.bsky.social · 2d
We will discuss the cutting-edge intersection of AI agents and bioinformatics, addressing real-world applications and future trends. Come prepared with your questions!

📅 November 17-19, 2025 at Stanford University, California
⏰ Still time to apply and register!
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scverse.bsky.social
scverse @scverse.bsky.social · 2d
Join us as we explore emerging trends in agentic AI applications across bioinformatics workflows.

✨ Featured Panelists:
Kexin Huang - Stanford University
Vega Shah, PhD - NVIDIA
Loic Royer - Chan Zuckerberg Biohub Network
Jonah Cool - Anthropic
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scverse.bsky.social
scverse @scverse.bsky.social · 2d
ICYMI!
🚀 NEW PANEL ANNOUNCEMENT: Agentic Workflows in Bioinformatics at scverse 2025! 🚀
We're thrilled to introduce an exciting panel discussion at the upcoming scverse Conference 2025!

More information in 🧵

#scverse2025 #Bioinformatics #AgenticAI #Conference
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scverse.bsky.social
scverse @scverse.bsky.social · 5d
🚀 Ready to join us?
Register: lnkd.in/dTRydMwj
ℹ️ More info: lnkd.in/dPc6sMHf

@kexinhuang.bsky.social @dr-alphalyrae.bsky.social @loicaroyer.bsky.social
2
scverse.bsky.social
scverse @scverse.bsky.social · 5d
We will discuss the cutting-edge intersection of AI agents and bioinformatics, addressing real-world applications and future trends. Come prepared with your questions!

📅 November 17-19, 2025 at Stanford University, California
⏰ Still time to apply and register!
1 3
scverse.bsky.social
scverse @scverse.bsky.social · 5d
Join us as we explore emerging trends in agentic AI applications across bioinformatics workflows.

✨ Featured Panelists:
Kexin Huang - Stanford University
Vega Shah, PhD - NVIDIA
Loic Royer - Chan Zuckerberg Biohub Network
Jonah Cool - Anthropic
1 3 5
scverse.bsky.social
scverse @scverse.bsky.social · 5d
🚀 NEW PANEL ANNOUNCEMENT: Agentic Workflows in Bioinformatics at scverse 2025! 🚀
We're thrilled to introduce an exciting panel discussion at the upcoming scverse Conference 2025!

More information in 🧵

#scverse2025 #Bioinformatics #AgenticAI #Conference
1 4 6
scverse.bsky.social
scverse @scverse.bsky.social · 6d
📅 November 17-19, 2025 at Stanford University, California
🏛️ Format: 2 days of main conference + 1 day of satellite workshops across the Bay Area

ℹ️ More info: scverse.org/conference2025
Register: buff.ly/18KAUfpSubmit
scverse.bsky.social
scverse @scverse.bsky.social · 6d
Calico's groundbreaking work in aging biology exemplifies the power of computational approaches in tackling complex biological questions. Join us to explore how cutting-edge computational methods are revolutionizing our understanding of biological systems, from aging to disease.
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scverse.bsky.social
scverse @scverse.bsky.social · 6d
🌟 Thank You to Our Silver Sponsor: Calico Life Sciences ! 🌟

We're excited to recognize Calico as a Silver Sponsor of scverse conference 2025! 🥈

Details in thread! 🧵
#scverse2025 #AgingResearch #ComputationalBiology #SingleCell #Longevity #CalicoLabs #SpatialOmics
1 1 2
scverse.bsky.social
scverse @scverse.bsky.social · 7d
📅 November 17-19, 2025 at Stanford University, California
🏛️ Format: 2 days of main conference + 1 day of satellite workshops across the Bay Area
ℹ️ More info: scverse.org/conference2025
scverse.bsky.social
scverse @scverse.bsky.social · 7d
This workshop will cover the foundational CELLxGENE Census resource, new spatial data integration, the Virtual Cells Platform (VCP) for unified models and workflows, standardized model packaging with MLFlow, and the CZ Benchmarks platform for transparent model evaluation.
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scverse.bsky.social
scverse @scverse.bsky.social · 7d
🔬 CZI Workshop at scverse 2025 🔬

Multimodal And Spatial Single Cell Data: From Data APIs to AI-driven Biological Discovery
🧵

@chanzuckerberg.bsky.social
#scverse2025 #SingleCell #SpatialOmics #CELLxGENE #VirtualCells #AIBiology
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scverse.bsky.social
scverse @scverse.bsky.social · 8d
Thank you, Tahoe, for helping make #scverse2025 possible! 🙏