In the meantime, you can find the full, remastered sprite sheets on The Spriter's Resource:

DK: www.spriters-resource.com/custom_edite...

Jr: www.spriters-resource.com/custom_edite...

The full (8 hour) video can be seen here, if you have time you didn't feel like using for better things:
youtu.be/jCG6eBYt13g

But if you just want the clips in context: the Beatles bits are 4:14:25 (mentioning the fanfic), 7:19:57 (Bigger than Jesus), and 7:53:52 (Let It Be):

Actually, even harder than editing Lily into the "More popular than Jesus apology," was colorizing and adding a beard to the only image I could find of Paul kissing.

The camera zooms into George during this scene, because I'm talking about Handmade Films, so I wonder how many people even saw Lily.