Tom Fiala
@tomfialab.bsky.social
100 followers 120 following 25 posts
Senior Scientist and Branco Weiss Fellow at @ethzurich.bsky.social Incoming Assistant Professor at Masaryk University, Brno, Czechia Alumnus of @columbiauniversity.bsky.social, NY Chemical Biology and Supramolecular Chemistry
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tomfialab.bsky.social
We have multiple PhD and Postdoc positions open in my new group at Masaryk University. Are you an excellent and motivated candidate interested in organic and peptide synthesis and chemical biology? Get in touch! Start in January 2026. www.fialalab.com
Appreciate sharing!
tomfialab.bsky.social
I believe communicating science and sparking interest in others is as important as doing the actual research. If you love organic chemistry, check out the Chemicator channel on Youtube! Beautiful graphics and nice explainers from an enthusiastic student.
www.youtube.com/@Chemicator
ChemiCator
Welcome to ChemiCator! 🔬 Dive Deep into the Fascinating World of Organic Chemistry 🔬 Are you passionate about organic chemistry? Whether you're a student striving for excellence, a curious mind eager...
www.youtube.com
tomfialab.bsky.social
TWeeP (This Week's Paper): The PTM sulfotyrosine is very hard to reliably identify due to instability and similarity to phosphoTyr. This week, I highlight a vivid debate in @natchembio.nature.com about the existence of sTyr in histones:
www.nature.com/articles/s41...
www.nature.com/articles/s41...
Mass spectrometry and enzyme assays refute histone tyrosine sulfation - Nature Chemical Biology
Nature Chemical Biology - Mass spectrometry and enzyme assays refute histone tyrosine sulfation
www.nature.com
Reposted by Tom Fiala
experientiacz.bsky.social
⭐🎉 Přinášíme skvělou zprávu a další obrovský úspěch! Tomáš Fiala, držitel Start-up grantu Nadace Experientia, získal prestižní ERC Starting grant pro mladé vědce! Svoji výzkumnou skupinu založí v říjnu 2025 na @masarykuniversity.bsky.social.

Tomášovi k tomuto úspěchu srdečně gratulujeme! 👏
tomfialab.bsky.social
Grant alert! 🚨 I am honored to receive the @erc.europa.eu Starting Grant. In the PROTEOFORMER project, we will develop chemical tools for precise control of individual protein states, aiming to probe the origins of neurodegeneration. 🧪 Stay tuned!
#ERCStG erc.europa.eu/news-events/...
The ERC awards €761m to the next generation of scientists in Europe
The European Research Council (ERC) has selected 478 early-career researchers across Europe to receive this year’s Starting Grants. With a total funding of €761 million, these grants support excellent...
erc.europa.eu
tomfialab.bsky.social
TWeeP (This Week's Paper): Hemes are ubiquitous in nature. Yet, their trafficking and dynamics remain underexplored. That's about to change thanks to probes that label neighboring proteins upon activation by heme from Hirayama and coworkers in @jacs.acspublications.org!
pubs.acs.org/doi/full/10....
pubs.acs.org
tomfialab.bsky.social
TWeeP (This Week's Paper): another fantastic publication from the Kanai lab in @jacs.acspublications.org. Check out how to generate isocyanates on demand from a stable hydroxamic acid–pyrrolidine conjugate and sulfonyl fluoride for fast protein labeling in live cells!
pubs.acs.org/doi/10.1021/...
pubs.acs.org
tomfialab.bsky.social
We have multiple PhD and Postdoc positions open in my new group at Masaryk University. Are you an excellent and motivated candidate interested in organic and peptide synthesis and chemical biology? Get in touch! Start in January 2026. www.fialalab.com
Appreciate sharing!
tomfialab.bsky.social
TWeeP (This Week's Paper): Cool supramolecular chemistry of bambusuril macrocycles! In @chemcomm.rsc.org, Heck et al. show strong complexation of the astatide-211 anion. The complex is stable in human serum! Nice progress towards At-based radiopharmaceuticals.
pubs.rsc.org/en/Content/A...
Bambusuril as Effective Astatide Sequestrator Agent by Hydrogen Bonding
Herein, we report a molecular-cage allowing strong chelation of the 211At radioanion. Propargylated bambus[6]uril shows good affinity towards iodide and astatide radiohalides, affording promising incl...
pubs.rsc.org
Reposted by Tom Fiala
experientiacz.bsky.social
Nadace Experientia zná držitele start-up grantu pro rok 2025!

👨‍🔬 Tomáš Fiala, který aktuálně působí na ETH Zürich, založí svoji výzkumnou skupinu na Masarykově univerzitě v Brně, kterou od ledna 2026 podpoří start-up grant Nadace Experientia ve výši 6 000 000 Kč.

Moc gratulujeme!
tomfialab.bsky.social
Selectively assembling collagen heterotrimers is a challenge. But not for us! Aminopropline-aspartate salt bridges drive the assembly of a hyperstable, a minimal-length, and a special blunt-ended collagen heterotrimer. Now out in
@angewandtechemie.bsky.social!
onlinelibrary.wiley.com/doi/10.1002/...
tomfialab.bsky.social
TWeeP (This Week's Paper): In Biomacromolecules, Mukherjee et al. present a neat way of stabilizing collagen triple helices and inducing their fibrillation via terminal aromatic capping groups. (Plus check out the fun TOC graphic!!)
pubs.acs.org/doi/abs/10.1...
Hyperstable and Fibril-Forming Collagen-Mimetic Peptides in Shortest Triple Helices: Empowering the Capping by π-systems
Developing collagen-mimetic peptides (CMPs) with short triple helices and fibril-forming ability remains challenging. Herein, we stabilized short CMPs (3–6 GPO repeats) by attaching extended aromatic π-system─fluorenyl groups at the N-terminus and tyrosine at the C-terminus. These modifications promoted triple helix folding through π–π interactions, acting as a “glue” to stabilize the structure and facilitate fibrillation. A single fluorenyl cap required 5 GPO repeats for helix formation, while double fluorenyl capping reduced this to 4 repeats. Notably, at pH 5.5, triple helices formed with only 3 GPO repeats. The double-capped CMPs exhibited hyperstability (Tm = 76 °C) and formed fibrillar networks at physiological pH. Biophysical and computational studies confirmed the role of π–π and CH–π interactions, along with hydrogen bonding, in stabilization. The minimalistic CMPs supported cell viability, demonstrating their potential for biomedical applications. This strategy offers a method to design highly stable, short CMPs that form robust fibrillar networks.
pubs.acs.org
Reposted by Tom Fiala
tomfialab.bsky.social
TWeeP (This Week's Paper): Selective protein cleavage under physiological conditions with a synthetic probe and no enzymes involved... sci-fi? No! Now a reality thanks to the cysteine formylation technology by Ojida, Hamachi and coworkers in JACS.
pubs.acs.org/doi/10.1021/...
A Protein Cleavage Platform Based on Selective Formylation at Cysteine Residues
Site-selective cleavage of the peptide backbone in proteins is an important class of post-translational modification (PTM) in nature. However, the organic chemistry for such site-selective peptide bond cleavages has yet to be fully explored. Herein, we report cysteine S-formylation as a means of selective protein backbone cleavage. We developed N-formyl sulfonylanilide as a cysteine-selective formylation reagent for peptides and proteins. Upon S-formylation with the reagent, the amide bond adjacent to the S-formylated cysteine is cleaved by hydrolysis under neutral aqueous conditions. Formylation probes bearing a protein ligand enabled the affinity-based selective cleavage of the target proteins not only in the test tube but also under biorelevant conditions such as in crude cell lysate and on the cell surface. These results demonstrate the high biocompatibility of this protein cleavage technology. A proof-of-concept study of cleavage-induced protein activation further demonstrates its utility as a platform for the functional regulation of proteins by artificial PTM.
pubs.acs.org