Josh Mitchell
@yoshanuikabundi.me
Comp chem, chemical biology, software development and science communication at Open Force Field @openforcefield.org @omsf.io
She/they/he 🩷💛🩵 🏳️🌈
She/they/he 🩷💛🩵 🏳️🌈
Reposted by Josh Mitchell
The PDB itself is probably also too idealized. For example, the fraction of cis-peptide bonds (doi.org/10.1038/1368), backbone tau-angles (doi.org/10.1107/S090...) and planarity of guanidines (doi.org/10.1107/S205...) all appear to depend on resolution
June 27, 2025 at 5:15 PM
The PDB itself is probably also too idealized. For example, the fraction of cis-peptide bonds (doi.org/10.1038/1368), backbone tau-angles (doi.org/10.1107/S090...) and planarity of guanidines (doi.org/10.1107/S205...) all appear to depend on resolution
I did exactly this for fun a few years ago, here I just pushed it to GH: github.com/Yoshanuikabu...
It's crap, barely worked, and probably doesn't build anymore, but it used to run (very slowly) in the browser as well as natively, and was only a weekend or so of work!
It's crap, barely worked, and probably doesn't build anymore, but it used to run (very slowly) in the browser as well as natively, and was only a weekend or so of work!
Yoshanuikabundi/metalloprotein
Contribute to Yoshanuikabundi/metalloprotein development by creating an account on GitHub.
github.com
March 29, 2025 at 12:46 AM
I did exactly this for fun a few years ago, here I just pushed it to GH: github.com/Yoshanuikabu...
It's crap, barely worked, and probably doesn't build anymore, but it used to run (very slowly) in the browser as well as natively, and was only a weekend or so of work!
It's crap, barely worked, and probably doesn't build anymore, but it used to run (very slowly) in the browser as well as natively, and was only a weekend or so of work!