#Arabidopsis
Transcriptomics and metabolomics analyses reveal the growth promoting effects of VOCs released by Clonostachys rosea f. catenulata on Arabidopsis thaliana

link.springer.com/article/10.1...
Transcriptomics and metabolomics analyses reveal the growth promoting effects of VOCs released by Clonostachys rosea f. catenulata on Arabidopsis Thaliana - Plant Growth Regulation
Plant Growth Regulation - Clonostachys rosea f. catenulate is a well-documented fungus, with extensive research reported on its antagonistic activity and mechanisms as a biocontrol. However, the...
link.springer.com
February 8, 2026 at 4:14 PM
Due to circumstances, I'm learning a lot abt thigmomorphogenesis (plant development in response to mechanical stimulation, e.g., touch) in Arabidopsis. My new postdoc Dr. Sungkyu Park joined the lab last month, who did a PhD on plant development in response to leaf removal & mechanical stimulation.
February 7, 2026 at 6:44 PM
Benthamiana rhapsody 🎶 🌱

How benthi is the go-to system for cracking the activation mechanism of an Arabidopsis TIR-NLR immune receptor— that’s the rhapsody.

Congrats He Zhao and Selvaraj for this wonderful collaboration 👇🏼 doi.org/10.64898/202...
February 7, 2026 at 11:58 AM
Structural basis for the broad recognition specificity of an Arabidopsis immune receptor https://www.biorxiv.org/content/10.64898/2026.02.04.703898v1
February 7, 2026 at 11:02 AM
Structural basis for the broad recognition specificity of an Arabidopsis immune receptor https://www.biorxiv.org/content/10.64898/2026.02.04.703898v1
February 7, 2026 at 11:02 AM
Transposable element-derived siRNAs control viral disease in Arabidopsis https://www.biorxiv.org/content/10.64898/2026.02.06.704401v1
February 7, 2026 at 11:02 AM
Transposable element-derived siRNAs control viral disease in Arabidopsis https://www.biorxiv.org/content/10.64898/2026.02.06.704401v1
February 7, 2026 at 11:02 AM
New publication in Plant, Cell & Environment 🌱

We dissect how multi-site phosphorylation of RPS6A controls protein translation during the critical dark-to-light transition in Arabidopsis seedlings.
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February 7, 2026 at 8:46 AM
Integrating Nitrate and Symbiosis: Evolutionary Rewiring of Conserved Nitrogen-Signalling Modules in Arabidopsis and Medicago
Integrating Nitrate and Symbiosis: Evolutionary Rewiring of Conserved Nitrogen-Signalling Modules in Arabidopsis and Medicago
Nitrogen is a major limiting nutrient for plant growth and a central driver of fertilizer use in agriculture. In many agricultural soils, nitrate is the main form of available nitrogen, but it is highly mobile and unevenly distributed, forcing plants to continuously adjust root growth to local supply. Legumes add an extra layer of complexity because they can also obtain ammonium through symbiotic nitrogen fixation in root nodules, which are carbon-expensive organs that must be regulated according to both external nitrate levels and internal nitrogen status. This review compares nitrogen signalling in the non-legume Arabidopsis thaliana and the model legume Medicago truncatula. Our aim is to understand how conserved pathways have been rewired to support these different nitrogen acquisition strategies. We focus on three core modules: CLE–CLV1/SUNN signalling, the NIN–NLP transcriptional module and the miR2111–TML pathway. In Arabidopsis, CLE–CLV1 acts mainly as a local low-nitrogen checkpoint that restricts lateral root emergence in nitrate-poor zones, while NLP7 integrates nitrate availability with root architectural responses. In Medicago, orthologous components have been recruited into the autoregulation of nodulation (AON) pathway, where nitrate-induced CLE peptides, NIN–NLP interactions and the systemic miR2111–TML module together integrate nitrate supply and rhizobial infection to coordinate nodulation with whole-plant nitrogen status and carbon cost. Within this network, the CLV1 ortholog SUNN acts as a central integration point. It responds to rhizobia-induced CLE peptides and to nitrogen-dependent systemic signals, including nitrate-induced CLE peptides, that influence lateral root growth in the absence of symbiosis. By contrasting these modules in Arabidopsis and Medicago, we show how legumes have layered symbiotic regulation onto ancestral nitrogen-signalling circuits that were first characterised in non-legume nitrate responses. This evolutionary perspective provides a mechanistic basis for future efforts to improve nitrogen use efficiency in crops by adjusting how CLE signalling, NIN/NLP activity and miR2111–TML-like modules link nitrogen status to root and nodule development.
sco.lt
February 6, 2026 at 11:38 PM
Plastid carbonic anhydrases are essential for growth of Arabidopsis on ambient air but not for photosynthesis url: academic.oup.com/plphys/artic...
Plastid carbonic anhydrases are essential for growth of Arabidopsis on ambient air but not for photosynthesis
In C3 plants, plastid carbonic anhydrases are essential for growth on ambient air but are not required for efficient CO2 assimilation.
academic.oup.com
February 6, 2026 at 4:43 PM
NEWS: Mum Knows Best – how maternal messages prime seeds for success

🧵 Mothers often guide offspring through the risky stages of early development. This is true for plants too, according to new research from our researchers and colleagues @earlhaminst.bsky.social: www.jic.ac.uk/news/mum-kno... 🌱
February 6, 2026 at 10:42 AM
MIRO1-mediated mitochondrial fusion is required for stomatal immunity in Arabidopsis
(a) MIRO1 transcript levels were measured by RT-qPCR using two primer pairs targeting the upstream and downstream regions of the gene. Two-week-old seedlings were treated with mock or 10 µM flg22 for 2 h prior to RNA extraction. (b) sMIRO1 expression was assessed in transgenic plants expressing a GUS reporter driven by the MIRO1 promoter. Two-week-old seedlings were treated with mock or 10 μM flg22 for 2 h and followed by GUS staining. Dashed boxes indicate regions enlarged to the right. Scale bar, 50 μm. Scale bar in the enlarged views is 10 μm. (c) RT-qPCR (left) showing MIRO1 expression in 2-week-old WT, miro1-2 mutants, and miro1-2 complementation lines expressing GFP-MIRO1 under its native promoter. Immunoblot (right) showing GFP-MIRO1 protein levels in the GFP-MIRO1/miro1-2 complementation lines. GFP-MIRO1 was detected with anti-GFP. Equal loading was confirmed by Ponceau staining. Immunoblotting was repeated three times with similar results. (d) Stomatal apertures measured in WT and miro1-2 mutant cotyledons after treatment with mock, 1 µM or 10 µM flg22 for 2 h. (e) Stomatal apertures measured in 4-week-old WT and miro1-2 mutant rosette leaves after treatment with mock or 10 µM flg22 for 2 h. (f) Stomatal apertures measured in 2-week-old WT and...
www.nature.com
February 5, 2026 at 8:55 PM
Hydrogen sulfide persulfidates OAS-A1 to balance cysteine levels in regulating Arabidopsis stomatal development
Hydrogen sulfide persulfidates OAS-A1 to balance cysteine levels in regulating Arabidopsis stomatal development
Liu et al. show that O-acetylserine(thiol)lyase (OAS)-A1 regulates stomatal development by balancing cysteine and hydrogen peroxide. Hydrogen sulfide enhances OAS-A1 activity via persulfidation on Cys28 and Cys42, which affects stomatal density.
dlvr.it
February 5, 2026 at 8:50 PM
New Article: "MIRO1-mediated mitochondrial fusion is required for stomatal immunity in Arabidopsis" rdcu.be/e2vq2

Phosphorylation of the mitochondrial protein MIRO1 promotes mitochondrial fusion and energy metabolism, enabling effective stomatal defence.
February 5, 2026 at 1:47 PM
Identification of PsbS binding proteins in Arabidopsis thaliana leaf chloroplasts under high light using TurboID-based proximity labeling www.frontiersin.org/journals/pla...
Frontiers | Identification of PsbS binding proteins in Arabidopsis thaliana leaf chloroplasts under high light using TurboID-based proximity labeling
Photosystem II Subunit S (PsbS) is a critical regulator of non-photochemical quenching (NPQ), which is a protective mechanism triggered to dissipate excess l...
www.frontiersin.org
February 5, 2026 at 1:31 PM
MIRO1-mediated mitochondrial fusion is required for stomatal immunity in Arabidopsis

https://www.vitaminrush.com/301010/miro1-mediated-mitochondrial-fusion-is-required-for-stomatal-immunity-in-arabidopsis/

Melotto, M., Fochs, B., Jaramillo, Z. & Rodrigues, O. Fighting for survival at the …
MIRO1-mediated mitochondrial fusion is required for stomatal immunity in Arabidopsis - Vitamin Rush
Melotto, M., Fochs, B., Jaramillo, Z. & Rodrigues, O. Fighting for survival at the stomatal gate. Annu. Rev. Plant Biol. 75, 551–577 (2024).
www.vitaminrush.com
February 5, 2026 at 12:40 PM
Validating our approach, we analyzed Arabidopsis meiotic mutants ( zyp1, figl1, recq4ab ) 🧬

We successfully recovered known recombination frequencies and landscape alterations, confirming that single-cell haplotyping can measure differences in recombination rates.
February 5, 2026 at 12:24 PM
Always happy to support model organism communities on @bsky.app - re-sharing this for any #Arabidopsis researchers out there (just thought I'd plant it in your feeds...)
February 5, 2026 at 6:50 AM
Where is the #Arabidopsis community on @bsky.app? Any #Brassica fans? See our recent protocol covering design principles and considerations for building and testing programmable and reversible CRISPRi-based gene circuits in plants.
🧪 #plantscience @natprot.nature.com @ryanlister.bsky.social
Designing and testing CRISPRi-based synthetic gene circuits in plants - Nature Protocols
This protocol details the design principles and procedures for building programmable CRISPRi-based gene circuits, and for testing individual components and the assembled circuits in various plant spec...
www.nature.com
February 5, 2026 at 6:47 AM
Got questions about #TAIR data, workflows, or functionality? Is there a research question you’re struggling to answer? A feature we don’t currently offer? Join us for TAIR office hours Feb 17! 🧪

Book a one-on-one session with a curator: bit.ly/3NYRmn6

#plantscience #plantbiology #Arabidopsis
February 4, 2026 at 3:41 PM
Beautiful work, @nickdesnoyer.bsky.social! I'm trying the same thing with XRM.
February 4, 2026 at 12:56 PM
Arabidopsis XPD functions upstream of CDKA;1 to regulate stomatal development

Li et al.

nph.onlinelibrary.wiley.com/share/4WFWA2...
February 4, 2026 at 10:27 AM
The transcription factor NO TRANSMITTING TRACT/WIP2 modulates cytokinin homeostasis in Arabidopsis - Díaz‐Ramírez - 2026 - The Plant Journal - Wiley Online Library onlinelibrary.wiley.com/doi/10.1111/...
The transcription factor NO TRANSMITTING TRACT/WIP2 modulates cytokinin homeostasis in Arabidopsis
The transcription factor NTT/WIP2 regulates cytokinin biosynthesis, signaling, and degradation genes (IPT5, AHP6, and CKX7, among others), modulating tissue-specific cytokinin homeostasis.
onlinelibrary.wiley.com
February 4, 2026 at 7:23 AM
Published by: Xiang Li, Hongkuan Wang, Ying Wang, Limin Zhang, Yingxiang Wang
📅 Published on: February 10, 2021
📄 Full Study: [DOI: 10.1007/s43657-021-00012-3] 🔗

#Arabidopsis #Metabolomics #Meiosis #NMR #PlantResearch #Genomics #AgricultureScience
February 4, 2026 at 4:51 AM
🚨 New Study on #Metabolomics in Meiosis! 🌱
🧬 A groundbreaking research on #Arabidopsis inflorescences reveals distinct metabolic profiles between wild-type and meiosis-defective mutants using 1H-NMR spectroscopy! 🧪
February 4, 2026 at 4:51 AM