Ondrej Mottl 🌿💻📈🌍⏳
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ondrejmottl.bsky.social
Ondrej Mottl 🌿💻📈🌍⏳
@ondrejmottl.bsky.social

Assistant Professor at the Department of Botany🌿 , Charles University.
Head of Laboratory of Quantitative Ecology (bit.ly/CUNI_QuantitativeEcology)
with a main focus on #communityecology 🏞️, #palaeoecology 🕰️, and interest in #datascience 💻. .. more

Environmental science 30%
Biology 28%
Pinned
1/🧵Introducing VegVault🌿🔒🏛️
A global database linking paleo- & neo-vegetation data with functional traits & abiotic drivers!
🚀A powerful tool for researchers exploring biodiversity dynamics across time & space

🔗 Website: bit.ly/VegVault
#VegVault #Ecology #Paleoecology #Vegetation #FunctionalTraits

Reposted by Ondřej Mottl

It was my honour to present a poster at the @tibsaarhus2026.bsky.social in Aarhus, Denmark, about my PhD project 'Functional Vegetation Paleoecology', which is being led by my awesome supervisor @ondrejmottl.bsky.social. 💫⏳🌿

Reposted by Ondřej Mottl

"... what was the fire inside you, when you coded till night to see your project working? It was building. And now you can build more and better, if you find your way to use AI effectively. The fun is still there, untouched."

antirez.com/news/158 - via @antirez.bsky.social

How is the R in Zed experience?

I think it is ok to leave it. The ONLY reason to nuke and start fresh is there was a commit with private info (unshared data, sensitive info, etc).

I just gave a talk at @tibsaarhus2026.bsky.social at the symposium Quantitative paleoecology in the era of big data conveyed by @suzetteflantua.bsky.social

Here are my slides online
ondrejmottl.github.io/TIBS-Present...

#TIBS2026 #tibs26
I just gave a talk at @tibsaarhus2026.bsky.social at the symposium Quantitative paleoecology in the era of big data conveyed by @suzetteflantua.bsky.social

Here are my slides online
ondrejmottl.github.io/TIBS-Present...

#TIBS2026 #tibs26

Forgot to tag @natynamesna.bsky.social!!!

💥I am with both of my PhD students in Aarhus for @tibsaarhus2026.bsky.social. Really excited to take my Lab for the first time to an international conference🙆
#TIBS2026

I also like the concept of 'digital garden', where authors can share their ideas as 'seedlings' and then see if they grow to something bigger over time.

I am saying this again and again. Every👏paper👏should👏have👏a👏website!
There is no excuse with #quarto to make and #github pages to host them.
One of the best things about having a background in new media, like web/graphic design, is when people criticize your research I can just defer them to this totally supplement, and highly-aesthetic interactive website that I built for my working paper.
The landing page of the working paper website also has an interactive D3 graphic that pretty clearly shows that recession responsiveness of labor-based turning point indicators increases when you input more sensitive measures of underemployment, it's basically a gradient from U1 to U6. #EconSky
Are you preparing a @quarto.org presentation (using reveal.js), but the conference requires a PDF (e.g. @tibsaarhus2026.bsky.social)? No worries, the decktape for the rescue!!!🙌 Do not forget to use `reveal --fragments=true`😉

github.com/astefanutti/...

#quarto #revealjs #presentation #conefrence
GitHub - astefanutti/decktape: PDF exporter for HTML presentations
PDF exporter for HTML presentations. Contribute to astefanutti/decktape development by creating an account on GitHub.
github.com

Reposted by Ondřej Mottl

One of the best things about having a background in new media, like web/graphic design, is when people criticize your research I can just defer them to this totally supplement, and highly-aesthetic interactive website that I built for my working paper.
The landing page of the working paper website also has an interactive D3 graphic that pretty clearly shows that recession responsiveness of labor-based turning point indicators increases when you input more sensitive measures of underemployment, it's basically a gradient from U1 to U6. #EconSky

This is such a cool idea!
Looking for an easy way to start conversations at #TIBS2026?
Pick one or more colored stickers linked to your research topics when you collect your name badge at the registration desk! 🟡🟣🟢
The image below explains how it works ⬇️
Looking for an easy way to start conversations at #TIBS2026?
Pick one or more colored stickers linked to your research topics when you collect your name badge at the registration desk! 🟡🟣🟢
The image below explains how it works ⬇️

Reposted by Ondřej Mottl

My #RPackageAdvent2025 recap is live! 📦✨ Get the complete guide to modern R package development: setup, docs, testing, CI/CD, and CRAN submission. All 25 days of tips, tools, and best practices in one place! Dive in! #RStats #RPackageDevelopment
Link: https://drmo.site/8ny3eU

Customisation of @vscode.dev is top💎🔥🌟! However, it is not for everyone, as you have to know what you like (which is earned by trying out different things)
If you use Positron / VS Code and the Material Icon theme (which is nice!), it sometimes guesses folder icons wrong / doesn't know about #rstats things like targets or renv or Quarto. Just found out that you can set your own custom folder icons! gist.github.com/rupeshtiwari...

Reposted by Ondřej Mottl

▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓▓░ 98.90%

Reposted by Ondřej Mottl

If you use Positron / VS Code and the Material Icon theme (which is nice!), it sometimes guesses folder icons wrong / doesn't know about #rstats things like targets or renv or Quarto. Just found out that you can set your own custom folder icons! gist.github.com/rupeshtiwari...

Really looking forward to speaking at the symposium 'Quantitative paleoecology in the era of big data: Trends, challenges, and opportunities'🙋
Preparing your trip to Aarhus for #TIBS2026? 🇩🇰

👀 Our program is online, do check it to learn about the talks of the parallel sessions, the two poster sessions and the four symposia happening in the mornings! ⬇️
share.google/HxSB12qaWtuK...
Program
share.google
Preparing your trip to Aarhus for #TIBS2026? 🇩🇰

👀 Our program is online, do check it to learn about the talks of the parallel sessions, the two poster sessions and the four symposia happening in the mornings! ⬇️
share.google/HxSB12qaWtuK...
Program
share.google

Anyone else have a coauthor who is so much fun to write with that you just find yourself grinning in some combination of satisfaction and pride as you edit a manuscript?

If not, get yourself one.

Merry Christmas!
🎄 Hope you’ve got all your presents ready 💝

Google search interest shows a stable pattern:

🎅 “Christmas gift wife” peaks just before Christmas Eve
🎅 “Christmas gift husband” peaks much earlier

#MerryChristmas to all of you! 🎁

📈 Google Trends (Nov 18–Dec 24, 2020–2024)
#dataviz #ggplot2
🎄 Hope you’ve got all your presents ready 💝

Google search interest shows a stable pattern:

🎅 “Christmas gift wife” peaks just before Christmas Eve
🎅 “Christmas gift husband” peaks much earlier

#MerryChristmas to all of you! 🎁

📈 Google Trends (Nov 18–Dec 24, 2020–2024)
#dataviz #ggplot2

Anyone else have a coauthor who is so much fun to write with that you just find yourself grinning in some combination of satisfaction and pride as you edit a manuscript?

If not, get yourself one.

Reposted by Ondřej Mottl

🚨 Pre-announcement! 🚨

We’re hiring for 2 x two-year, full-time roles to join me and the wider @palaeoverse.bsky.social team @es-ucl.bsky.social.

- Research Software Engineer (REF: B04-06999): lnkd.in/eNRBiPnP

- Community Engagement Coordinator (REF: B04-06998): lnkd.in/ejUACCzn

My experience is that in academia, people generally do not understand the difference between R and RStudio (language and EDA). From a student perspective, they run the RStudio app to do the analysis, so they cite that🤷

I think you wanted to tag the actual account as @jvs-avs.bsky.social 😉

I am planning to for the next IAVS! It will be hosted in Gijón, Spain!
Are you working with #fossilpollen? Sign up! There will be a session about vegetation history😉
The website for the 68th Annual Symposium of the International Association for Vegetation Science has been launched:
2026gijon.iavs-meetings.org
Many thanks to Borja Jiménez-Alfaro and his colleagues for this invitation.
See you in June in Gijón, on the northern coast of Spain.