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Fabrice Senger @senger.bsky.social · 10h

While they happily grow, I wouldn't it all of them

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Fabrice Senger @senger.bsky.social · 10h

The actual question is more like : does the mean tell it all

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Fabrice Senger @senger.bsky.social · 11h

www.nature.com/articles/s41...

Cell tracking with accurate error prediction - Nature Methods

OrganoidTracker 2.0 enables fast and accurate cell tracking in complex systems such as developing organoids. A key aspect of the work is determining cell tracks with error probabilities for any tracking feature, from cell cycles to lineage trees.

www.nature.com

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Fabrice Senger @senger.bsky.social · 12h

Reffering segmentation

Fabrice Senger @senger.bsky.social · 12h

SAM3 ahead

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Reposted by Fabrice Senger

bioRxiv Cell Biology @biorxiv-cellbio.bsky.social · 23h

Oscillatory and elevated flow distinctly regulate gene expression in human coronary artery endothelial cells https://www.biorxiv.org/content/10.1101/2025.10.10.681055v1

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Reposted by Fabrice Senger

IMAG'IC @imag-ic.bsky.social · 1d

At #Mifobio2025, Lene Vimeux from the IMAG-IC platforms & Simon Lachambre led the workshop “Segmentation with multiplexed images with AI: discover InstantSeg and customize your model.”
A great and inspiring session👏

#AI #Imaging #Microscopy #Mifobio2025
@gdrimabio.bsky.social

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Fabrice Senger @senger.bsky.social · 1d

Félicitations 🎉

Reposted by Fabrice Senger

bioRxiv Biophysics @biorxiv-biophys.bsky.social · 2d

Low-Cost 3D Printed Optics for Super-Resolution Multifocal Structured Illumination Microscopy https://www.biorxiv.org/content/10.1101/2025.10.09.680962v1

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Reposted by Fabrice Senger

Nat Prunet @nat-prunet.bsky.social · 2d

Love these!

Artologica aka Michele Banks @artologica.net · 3d

There's more to #sciart than highly detailed paintings of nature. Kelp Pods by Anicka Yi

Gold pod like sculptures suspended from the ceiling of a gallery

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Reposted by Fabrice Senger

Gaël Varoquaux @gaelvaroquaux.bsky.social · 2d

A speech about what drives me, how science and open source are bitter victories, unable to make improve the world if society does not embrace them for the better:
gael-varoquaux.info/personnal/a-...

A national recognition; but science and open source are bitter victories

I have recently been awarded France’s national order of merit, for my career, in science, in open source, and around AI. The speech that I gave carries messages important to me (French below;...

gael-varoquaux.info

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Fabrice Senger @senger.bsky.social · 2d

Bonne convalescence

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Fabrice Senger @senger.bsky.social · 3d

Eh ben bravo hein, vive la France

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Reposted by Fabrice Senger

Sebastian Raschka (rasbt) @sebastianraschka.com · 3d

8/8 Anyways, it's nice paper and a refreshing read in the era of LLMs: arxiv.org/abs/2510.04871

Less is More: Recursive Reasoning with Tiny Networks

Hierarchical Reasoning Model (HRM) is a novel approach using two small neural networks recursing at different frequencies. This biologically inspired method beats Large Language models (LLMs) on hard ...

arxiv.org

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Reposted by Fabrice Senger

🍁 Bryan Heit, PhD 🍁 @bryanheit.bsky.social · 3d

This is insane. 13 years ago we bought a million dollar #microscope to do this type of super-resolution imaging. Today, all you need is a smartphone and a few hundred bucks of off-the-shelf components 🤯

www.nature.com/articles/s41...

Direct single-molecule detection and super-resolution imaging with a low-cost portable smartphone-based microscope - Nature Communications

Loretan and colleagues present a low-cost smartphone-based microscope capable of detecting single-molecule fluorescence. This approach opens doors to personalised and widely distributed applications in diagnostics, biosensing, and science education.

www.nature.com

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Reposted by Fabrice Senger

Gaëlle Recher @gaellerecher.bsky.social · 3d

What makes #MiFoBio2025 so unique?

Top notch experiments being disassembled from the lab, transported to Seignosse, and then used there. ⬇️ 👁️

Big up! @slfort.bsky.social and team
👏

Risky? yes
Bold? yes
Useful? damn yes!

You do not cook pasta in cold water 🙃

Sandrine Lévêque Fort 🔬 @slfort.bsky.social · 3d

On the way to #MiFoBio2025, for 4 different workshops on self blinking dyes, fast FLIM, ModLoc and extended focus+ deep learning ! The car is fully packed ! Thanks for the help/loan to @abbelight.bsky.social, oxxius, Nikon and Hamamatsu. Stay tuned for more details ! @gdrimabio.bsky.social 🔬🔥

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Fabrice Senger @senger.bsky.social · 3d

do you have ever used the Anderson-Darling test ?

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Reposted by Fabrice Senger

EMBO @embo.org · 5d

Learn all things #cytoskeleton #research in an interdisciplinary environment at EMBO Workshop "Structure and Function of the Cytoskeleton" in Paris, FR, 7–10 April 2026.

Deadline: 20 December 2025

https://meetings.embo.org/event/26-cytoskeleton
#EMBOCytoskeletalFunction #EMBOevents #conference 🧪

Structure and Function of the Cytoskeleton

The cytoskeleton, a dynamic and intricate network of protein filaments, is found within the cytoplasm of all cells, from bacteria and archaea to complex eukaryotes. This essential cellular component …

meetings.embo.org

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Fabrice Senger @senger.bsky.social · 4d

Captivating not only for EMT officionados

Carmelo Ferrai @carmeloferrai.bsky.social · 4d

Epithelial-mesenchymal transition

www.cell.com/cell/fulltex...

Epithelial-mesenchymal transition

Epithelial-mesenchymal transition (EMT) is a conserved multi-step cellular program that plays an essential role across a range of biological processes. This review covers the roles and states of EMT i...

www.cell.com

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Reposted by Fabrice Senger

Jean-Yves Tinevez @jytinevez.bsky.social · 5d

Job alert!

We are looking for a bioimage analysis to work in an image analysis core facility in beautiful Paris. Can I ask you to share this opportunity with your networks?

See also on the forum:
forum.image.sc/t/research-e...

Research engineer in Bioimage Analysis for the researchers of the inIdEx FORMULA

Hi all We are looking for a bioimage analysis to work in an image analysis core facility in beautiful Paris. Can I ask you to share this opportunity with your networks? The position is in the Instit...

forum.image.sc

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Reposted by Fabrice Senger

paveltomancak.bsky.social @paveltomancak.bsky.social · 5d

Jonathan's "Opus Magnum" is finally out. Fundamental discovery. Congratulations!

Max Planck Institute of Molecular Cell Biology and Genetics @mpi-cbg.de · 5d

Jonathan Rodenfels @mpi-cbg.de, Pablo Sartori @gimmfoundation.bsky.social, and Tommaso Cossetto identified two thermodynamic rules governing the growth and energy utilization of single-celled organisms. Publication in @nature.com Communications. www.mpi-cbg.de/news-outreac...

Cracking organisms’ energy code

Researchers define rules governing how growing microorganisms use energy efficiently

www.mpi-cbg.de

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Reposted by Fabrice Senger

Claudia Bank @cbank.bsky.social · 5d

Please spread the word! 10 days left to apply for this #sciencejobs as Assistant Professor Tenure Track in Quantitative Cell Biology 👩‍🔬
@izb-unibern.bsky.social @unibe.ch! ohws.prospective.ch/public/v1/jo...
#QueerInSTEM #DisabledInSTEM #BlackInSTEM #WomenInSTEM #CarersInSTEM #AcademicSky #HigherED

Uni Bern: Assistant Professor with tenure-track for Quantitative Cell Biology

Start date of employment: anticipated for August 2027

ohws.prospective.ch

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Reposted by Fabrice Senger

Quite Interesting @qi.com · 5d

In Basel, Switzerland in 1474 a chicken mistaken for a rooster was accused of witchcraft after laying an egg. The chicken was found guilty and burned to death.

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Reposted by Fabrice Senger

Gaëlle Recher @gaellerecher.bsky.social · 5d

Do not miss Pierre!

(I am absolutely not biaised 😅)

GdR ImaBio @gdrimabio.bsky.social · 7d

#Mifobio2025

Focus on the module 5:
👉 Physical measurements, control and handling -Mechanobiology

We are delighted to welcome Pierre NASSOY
@univbordeaux.bsky.social

Lecture : “formation, morphometrics and mechanics of epiblast models”

👉 imabio-cnrs.fr

#GDRimabio #TreeFrog_Therapeutics

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Reposted by Fabrice Senger

IMAG'IC @imag-ic.bsky.social · 6d

Registration is now open for the Cochin #QuPath training course for the manipulation of Fluo or color pyramid images, #histology or #microscopy, with the application of #deeplearning
November 5, 2025
November 12, 2025
@institutcochin.bsky.social
institutcochin.fr/formation-co...

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