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moldynfr.bsky.social
Moldyn Freiburg
@moldynfr.bsky.social
49 followers 37 following 4 posts
We are the Stock research group from the Institute of Physics of the University of Freiburg. Interested in biological physics, model building and data analysis.
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moldynfr.bsky.social
Moldyn Freiburg @moldynfr.bsky.social · Dec 13
Newest work from Sofia, Franziska and Gerhard: an assessment how far state models similar to MSMs can describe non-Markovian dynamics. Out now as preprint under: arxiv.org/abs/2412.08660 #compchem
Markov-type state models to describe non-Markovian dynamics
When clustering molecular dynamics (MD) trajectories into a few metastable conformational states, the Markov state models (MSMs) assumption of timescale separation between fast intrastate fluctuations...
arxiv.org
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Reposted by Moldyn Freiburg
herrflow.bsky.social
Steffen Wolf @herrflow.bsky.social · Dec 6
Come to our CECAM workshop in March 2025 at Lausanne!
anunesalves.bsky.social
Ariane Nunes Alves @anunesalves.bsky.social · Dec 5
If you are a fan of ligand binding kinetics, come to the CECAM workshop that @herrflow.bsky.social, Rebecca Wade, Giovanni Bottegoni and I are organizing next year in Lausanne. The registration deadline is January 10, hurry up!
#compchem
www.cecam.org/workshop-det...
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moldynfr.bsky.social
Moldyn Freiburg @moldynfr.bsky.social · Dec 3
Thank you!
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moldynfr.bsky.social
Moldyn Freiburg @moldynfr.bsky.social · Dec 3
Newest work of our group: Ahmed, Emanuel and Gerhard report on how allosteric information is transmitted via coupling of contact clusters within proteins. #compchem #allostery #biophysics #ai pubs.acs.org/doi/10.1021/...
Allosteric Communication Mediated by Protein Contact Clusters: A Dynamical Model
Describing the puzzling phenomenon of long-range communication between distant protein sites, allostery is of paramount importance in biomolecular regulation and signal transduction. It is commonly as...
pubs.acs.org
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moldynfr.bsky.social
Moldyn Freiburg @moldynfr.bsky.social · Nov 28
...and we're here now, too! Looking forward to post about science and general stuff from now on.
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