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3D'omics @3domics.bsky.social · 8d

Did you know that #3Domics had their last in-person meeting last week? We were in beautiful Leuven, discussing the final steps of the project. So good to see so many familiar faces! Excited to share more results soon!

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3D'omics @3domics.bsky.social · Jul 30

Do you know the EU results packs? They provide excellent summaries of topics, such as "Microbiomes and holobiomes as drivers of a sustainable circular bioeconomy". 🦠

@3domics.bsky.social was featured this month! 🔥 Check it out cordis.europa.eu/article/id/4... (foto credit: Bryan Wang)

Zooming in on microbial life

A pioneering technology that identifies where microbes live and what they do inside the body could change how we understand their role in...

cordis.europa.eu

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3D'omics @3domics.bsky.social · Jul 29

Enjoying your summer break? ☀️
@3domics.bsky.social is working hard 👩‍💻 to provide you with exciting 🦠🔬 research once you're back 🏝️.
We are now starting into the hot phase of the last 5 months of the project 🔥🔥🔥
www.3domics.eu

Home

www.3domics.eu

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3D'omics @3domics.bsky.social · Jun 3

Are you here for the microbes? Listen to this fun podcast!

Center for Evolutionary Hologenomics @hologenomics.bsky.social · Jun 3

Please listen and share it with your network @ucph.bsky.social, @dg.dk, @ehologenome.bsky.social, @3domics.bsky.social, @holobiontbiology.bsky.social, @hologen.bsky.social
microbial-connections.simplecast.com/episodes/how...

What if microbes control your thoughts? Studying evolution and ecology from a holobiont perspective | Microbial Connections

What if microbes control your thoughts? From shrews to newts to humans, microbes have been shaping life for millions of years. But their influence goes beyond digestion—some even impact behaviour, dom...

microbial-connections.simplecast.com

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3D'omics @3domics.bsky.social · May 26

You might already know our amazing explainer video created by the talented team at @madeclear.bsky.social — if not, check it out here: www.youtube.com/watch?v=Lo75...

We are excited to share that our second video is now in production and launching this summer!

3D'omics @3domics.bsky.social · May 16

And just like that the #MicrobiomeAtlas course is over. Thank you all for an amazing week and 5 excellent presentations today! #SpatialMicrobiology #3Domics

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3D'omics @3domics.bsky.social · May 15

Another productive day at the #MicrobiomeAtlas course—so much learning and discovery! Can’t wait to hear from the participants tomorrow. Time is just flying by! #3Domics

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3D'omics @3domics.bsky.social · May 14

Today’s bioinformatics session of the #MicrobiomeAtlas course was held with a beautiful view over #Copenhagen 🤩 #3Domics #ScienceWithAView

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3D'omics @3domics.bsky.social · May 13

Day 2 of the #MicrobiomeAtlas course! Yesterday we got to know each other, enjoyed some games and pizza. Today we dove into the labs for hands-on technique learning! Excited for what’s to come! #3Domics #ScienceInAction #LabDay

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3D'omics @3domics.bsky.social · May 5

#Spatial #Microbiomics course starting in one week!

We are so excited to show the world what 3D'omics is working with!

If you are interested & in Copenhagen, consider joining. 2 last-minute spots just opened up!

3D'omics @3domics.bsky.social · Feb 12

Only 4 days left! Register now!

Free workshop on #Spatial #Microbiomics – From Sampling to Analysis"

Join us in May in #Copenhagen at the Center for Evolutionary Hologenomics. Ideal for PhDs, postdocs & other microbiome enthusiasts.

www.3domics.eu/TrainingEven...

Please share!

Reposted by 3D'omics

Center for Evolutionary Hologenomics @hologenomics.bsky.social · Apr 28

💡🎧How can a #microbe responsible for #ulcers be either beneficial or harmful? Why are fewer children infected today and what does that mean for our #health? Sandra Breum Andersen gives us the answers in the latest #MicrobialConnections episode👇

microbial-connections.simplecast.com/episodes/how...

How growing miniature stomachs can help uncover our evolutionary history with microbes | Microbial Connections

How can a microbe responsible for ulcers be either beneficial or harmful to you depending on your genetic background and at what time in life you are infected? And why are fewer Danish children today ...

microbial-connections.simplecast.com

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3D'omics @3domics.bsky.social · Apr 11

📢 Did you see the first OA #publication of 3D'omics yet?!

First author Victoria Drauch & colleagues have published their results on differential effects of synbiotic delivery routes in chicken challenged with Salmonella infections!
Read the full study here!
www.sciencedirect.com/science/arti...

Differential effects of synbiotic delivery route (feed, water, combined) in broilers challenged with Salmonella Infantis

Salmonella enterica subsp. enterica serovar Infantis (S. Infantis) presents a persistent and multi-drug-resistant threat to poultry production, highli…

www.sciencedirect.com

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Reposted by 3D'omics

Haris Zafeiropoulos @hariszaf.bsky.social · Apr 8

Hi #microbiome community.

If you are interested in microbial networks, feel free to have a look and register in our summer school!

Two days with talks and hands-on on how to annotate your networks and come up with testable hypotheses.
24 and 25 Sep 2025, Leuven , Belgium

@3domics.bsky.social

Summer School on Data integration with Microbial Networks and Community Models

Bootstrap 5 Tech Conference Template

msysbiology.com

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Reposted by 3D'omics

Center for Evolutionary Hologenomics @hologenomics.bsky.social · Mar 31

🧀What do cheese, sourdough, & yogurt have in common? #Microbes!🦠

🎧Listen to postdoc Veronica Sinotte in this episode of our podcast #MicrobialConnections as she explains how #FermentedFood is actually "controlled rot" & how it might have evolved💡
microbial-connections.simplecast.com/episodes/fer...

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3D'omics @3domics.bsky.social · Mar 4

Interested in #Food #system #innovations and #climate #change?
Attend our seminar "#microbial game-changers": we will be exploring how microorganisms are driving innovation in sustainable food production and climate solutions.

7 April - 9am-4pm - Litteraturhuset i Oslo

www.nmbu.no/en/research/...

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3D'omics @3domics.bsky.social · Feb 17

*Deadline extended!*

Last chance to join our free workshop on #Spatial #Microbiomics on 12-16 May in #Copenhagen at the Center for Evolutionary Hologenomics. Ideal for PhDs, postdocs & other microbiome enthusiasts.

www.3domics.eu/TrainingEven...

Please share!

Microbiome Atlas

www.3domics.eu

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3D'omics @3domics.bsky.social · Feb 12

Only 4 days left! Register now!

Free workshop on #Spatial #Microbiomics – From Sampling to Analysis"

Join us in May in #Copenhagen at the Center for Evolutionary Hologenomics. Ideal for PhDs, postdocs & other microbiome enthusiasts.

www.3domics.eu/TrainingEven...

Please share!

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3D'omics @3domics.bsky.social · Feb 3

Deadline approaching! Free workshop on #Spatial #Microbiomics – From Sampling to Analysis"
Join us in May in #Copenhagen at
@hologenomics.bsky.social Ideal for PhDs, postdocs & other microbiome enthusiasts. Register until February 16th: www.3domics.eu/TrainingEven...
Please share!

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Reposted by 3D'omics

Center for Evolutionary Hologenomics @hologenomics.bsky.social · Jan 7

📢Don't miss out on a great opportunity to join a #free exciting workshop on #Spatial #Microbiomics - From #Sampling to #Analysis in May 2025 here @hologenomics.bsky.social in Copenhagen!🦠

The workshop is arranged by @3domics.bsky.social!
@dg.dk, @holobiontbiology.bsky.social, @hologen.bsky.social

3D'omics @3domics.bsky.social · Jan 7

Join us in May in #Copenhagen at @hologenomics.bsky.social
for an exciting #workshop on #microbiomics! "Spatial #Microbiomics – From Sampling to Analysis" 📷May 2025. Ideal for PhDs, postdocs & other microbiome enthusiasts. Register until February 16th: 3domics.eu/TrainingEven... Please re-post!

Microbiome Atlas

3domics.eu

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3D'omics @3domics.bsky.social · Jan 7

Join us in May in #Copenhagen at @hologenomics.bsky.social
for an exciting #workshop on #microbiomics! "Spatial #Microbiomics – From Sampling to Analysis" 📷May 2025. Ideal for PhDs, postdocs & other microbiome enthusiasts. Register until February 16th: 3domics.eu/TrainingEven... Please re-post!

Microbiome Atlas

3domics.eu

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3D'omics @3domics.bsky.social · Dec 17

The learning outcomes focus on gaining an understanding of the differences, challenges, and benefits between micro-scale and conventional microbiomic methods. They also include getting hands-on experience and gaining fundamental expertise to run this workflow.

3D'omics @3domics.bsky.social · Dec 17

Looking for something exciting to learn next year?
📣 Join the 3D'omics Workshop: "Spatial Microbiomics – From Sampling to Analysis" 📅 May 12-16, 2025,📍Copenhagen, DK
Ideal for PhDs, postdocs & other microbiome enthusiasts!

🔗 Register now: www.3domics.eu/TrainingEven...

#Microbiome #Workshop

Microbiome Atlas

www.3domics.eu

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3D'omics @3domics.bsky.social · Nov 26

🐾New insights into #hologenomics! Raphael Eisenhofer
et al. explore the complex relationship between #wild #vertebrates and their #microbiomes🦠
The study suggests how to generate robust and efficient hologenomic data from wild vertebrates 👇
ceh.ku.dk/news/2024/ne...

New insights into hologenomics research in wild vertebrates

In a new technical paper just published in Methods in Ecology and Evolution, researchers highlight the potential of hologenomics to deepen our understanding of biological systems from a host-microbiot...

ceh.ku.dk

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Reposted by 3D'omics

Christoph Kaleta @kaletalab.bsky.social · Nov 25

👇Three days left to apply👇

Christoph Kaleta @kaletalab.bsky.social · Nov 15

1/3 🌍 We're hiring! The Medical Systems Biology Lab at Kiel University is looking for a passionate #PostDoc in #Metabolic #Microbiome #Modeling. Join us at one of Europe’s microbiome research hubs and push the boundaries of microbiome science! @kieluni @UKSH_KI_HL
🔗 jobs.uksh.de/job/Kiel-Pos...

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3D'omics @3domics.bsky.social · Nov 25

Check out @jorgelanga.bsky.social's poster 😎 and learn more about bioinformatic pipelines for holo-omic data!
And don't forget to vote for best poster ;)

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