Alexandra Dallaire
@alexdallaire.bsky.social
180 followers 230 following 28 posts
Symbiotic fungi, genomes and transposons 🍄🧬 🇨🇦 → 🇬🇧 → 🇯🇵
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Reposted by Alexandra Dallaire
levine-lab.bsky.social
Check out this new Levine-Lampson collaboration, led by the talented Hyuk-Joon Jeon.

We explored the consequences of inheriting long telomeres from dad and short telomeres from mom. Or the reciprocal. Turns out, parent-of-origin matters (in mice, at least).

authors.elsevier.com/c/1loW-3QW8S...
authors.elsevier.com
Reposted by Alexandra Dallaire
hectormontero.bsky.social
Learn about loss and retention of arbuscular mycorrhizal symbiosis in carnivorous plants in our latest publication in @newphyt.bsky.social ! nph.onlinelibrary.wiley.com/doi/10.1111/...
Reposted by Alexandra Dallaire
talbotlabtsl.bsky.social
The great Claudio Scazzocchio- fungal geneticist and polymath - giving keynote first talk in Chania - on the evolution of nitrogen utilization in eukaryotes #IFBC25
Reposted by Alexandra Dallaire
francespi.bsky.social
Very excited to share that my first 1st author publication is available at the journal of #NewPhytologist !

Congratulations to the entire team that worked on this project including the #KewFungarium Team. 👏 🍄‍🟫

If you are interested in the topic, feel free to read it here: doi.org/10.1111/nph....
Whole genome sequencing of historical specimens from the world's largest fungal collection yields high‐quality assemblies
High-throughput molecular studies of museum specimens (museomics) have great potential in biodiversity research, but fungal historical collections have scarcely been examined, leading to no comprehe...
doi.org
alexdallaire.bsky.social
We have the same questions! I imagine it could have been beneficial for some of the ancestors to become mutators. I'd love to compare genome stability across the different lineages 🤓
Reposted by Alexandra Dallaire
maitesaura.bsky.social
New preprint! 🐛 Root-knot nematodes hijack root cells, turning them into feeding sites and making plants very sick. Using a cross-species scRNA-seq approach we mapped this process and show how this knowledge can be used to engineer resistant crops.🌱 A summary🧵 :
www.biorxiv.org/content/10.1...
alexdallaire.bsky.social
The fatty acid synthase was lost at the origin of the Glomeromycotina lineage. All species have delta, and only the Glomeraceae family lost epsilon
alexdallaire.bsky.social
Thank you, and yes, l'd love to find out if delta is compensating! I also wonder how cell cycle entry is regulated. I suspect carbon and phosphate availability are key, which is interesting to think about given their reliance on hosts for fatty acids, and that their 'job' is to mine Pi from the soil
alexdallaire.bsky.social
Also the word is out: I’m starting my own research group in my scientific hometown, Quebec @ulaval.ca 🇨🇦 More soon!
alexdallaire.bsky.social
Many thanks to all co-authors Tania, Samik, Tomoko, to Uta @paszkowskilab.bsky.social, who made this adventure possible, @hectormontero.bsky.social and to our dear neighbours @RIKEN, the Hayashi Team
alexdallaire.bsky.social
We welcome all feedback, and we’re looking forward to discussing this work (and more!) at upcoming conferences #IMMM2025 and @ifbc-2025.bsky.social
alexdallaire.bsky.social
For AM fungi, this has implications for developing host-free culture and genetic transformation methods. Evolutionarily speaking, it’s fascinating that 2 lineages of endosymbiotic fungi experienced similar genes losses. This kind of convergent reduction is also observed in endosymbiotic bacteria 🦠
alexdallaire.bsky.social
Our findings point to a higher level of integration between AM fungi and plants than previously appreciated, and suggest the existence of a regulatory and/or functional contribution provided by a host to the fungal cell cycle 🧬🍄
alexdallaire.bsky.social
In symbiosis with a host, we detect regularly-spaced nuclei pairs that appear to be mitotic. We find paired nuclei in spores germinated in vitro much less frequently. This suggests that the Glomeraceae cell cycle is active in planta, coinciding with the up-regulation of replication gene expression.
alexdallaire.bsky.social
This raises the question of how these fungi can replicate DNA. We grew the model species R. irregularis in vitro for 3 weeks without a host, and detected no increase in chromosomal DNA amount – if anything, it decreases. This suggests that the cell cycle is inactive in asymbiotic spores.
alexdallaire.bsky.social
The Glomeraceae family of AM fungi has an unexpectedly reduced replisome, lacking the leading strand DNA polymerase and associated co-factors.

AM fungi have therefore experienced reductive evolution beyond the loss of the fatty acid synthase.
alexdallaire.bsky.social
In this study, we found that two major lineages of endosymbiotic fungi have lost DNA polymerase genes.

In AM fungi, DNA polymerase losses are lineage-specific.

Microsporidia lost the same DNA polymerases and accessory co-factors as AM fungi, but in a slightly different order.
Reposted by Alexandra Dallaire
official-smbe.bsky.social
We are excited to announce the SMBE Fellows Program! ✍️

Designed to provide networking and mentorship opportunities to early-career researchers through scientific writing in evolutionary biology for @molbioevol.bsky.social and @genomebiolevol.bsky.social

📆 Aug. 31

🔗 smbe.org/smbe-fellows-program
Reposted by Alexandra Dallaire
mrillig.bsky.social
Very happy to share this paper, out in Nature, written with Henning, whom I met during my sabbatical at @oistedu.bsky.social

From bench to big boss: mitigating the widening gap between PI and lab

An important topic....would be curious to hear your thoughts...

www.nature.com/articles/d41...
From bench to big boss: mitigating the widening gap between PI and lab
Laboratory dynamics can change as the age and experience of the principal investigator increase. But there are ways to combat this.
www.nature.com