Arjun Dave
@bluebrain.bsky.social
PhD Candidate @Kavli Institute for Systems Neuroscience
Exploring norepinephrine locus coeruleus system 🧠 (and life!)
Exploring norepinephrine locus coeruleus system 🧠 (and life!)
Reposted by Arjun Dave
The goal of a PhD is not to learn some facts or read a few papers or learn a bunch of techniques. The goal of a PhD is to learn independence, problem solving, how to finish things you start, resilience, & gain the ability to adapt & think creatively. Learning these things is hard.
August 13, 2025 at 5:28 PM
The goal of a PhD is not to learn some facts or read a few papers or learn a bunch of techniques. The goal of a PhD is to learn independence, problem solving, how to finish things you start, resilience, & gain the ability to adapt & think creatively. Learning these things is hard.
Check out the poster at OHBM tomorrow and oral presentation on 28th June (ww6.aievolution.com/hbm2501/Abst...)! #OHBM #OHBM2025
June 25, 2025 at 11:36 AM
Check out the poster at OHBM tomorrow and oral presentation on 28th June (ww6.aievolution.com/hbm2501/Abst...)! #OHBM #OHBM2025
Reposted by Arjun Dave
Drumroll... The SPM team will announce that SPM is now fully accessible from Python! 🐍 Learn more about SPM-Python at the SPM roundtable event (Friday, 1pm) and poster number 1841 at #OHBM2025. Try the beta for yourself at github.com/spm/spm-python [2/7]
GitHub - spm/spm-python: The Python interface to SPM
The Python interface to SPM. Contribute to spm/spm-python development by creating an account on GitHub.
github.com
June 23, 2025 at 8:06 AM
Drumroll... The SPM team will announce that SPM is now fully accessible from Python! 🐍 Learn more about SPM-Python at the SPM roundtable event (Friday, 1pm) and poster number 1841 at #OHBM2025. Try the beta for yourself at github.com/spm/spm-python [2/7]
Reposted by Arjun Dave
We are very excited to announce the open release of a new 170 participant dataset: Linked MEG, TMS, multimodal 3T MRI, 7T MRI, Connectom MRI, cognitive /questionnaire data. Immense effort from a fabulous
CUBRIC team. Paper by Carolyn McNabb et al: doi.org/10.1038/s415...
CUBRIC team. Paper by Carolyn McNabb et al: doi.org/10.1038/s415...
February 6, 2025 at 11:43 AM
We are very excited to announce the open release of a new 170 participant dataset: Linked MEG, TMS, multimodal 3T MRI, 7T MRI, Connectom MRI, cognitive /questionnaire data. Immense effort from a fabulous
CUBRIC team. Paper by Carolyn McNabb et al: doi.org/10.1038/s415...
CUBRIC team. Paper by Carolyn McNabb et al: doi.org/10.1038/s415...
Reposted by Arjun Dave
New paper in Imaging Neuroscience by Clemens Pollak, Martin Reuter, et al:
FastSurfer-LIT: Lesion inpainting tool for whole-brain MRI segmentation with tumors, cavities, and abnormalities
doi.org/10.1162/imag...
FastSurfer-LIT: Lesion inpainting tool for whole-brain MRI segmentation with tumors, cavities, and abnormalities
doi.org/10.1162/imag...
February 4, 2025 at 11:16 AM
New paper in Imaging Neuroscience by Clemens Pollak, Martin Reuter, et al:
FastSurfer-LIT: Lesion inpainting tool for whole-brain MRI segmentation with tumors, cavities, and abnormalities
doi.org/10.1162/imag...
FastSurfer-LIT: Lesion inpainting tool for whole-brain MRI segmentation with tumors, cavities, and abnormalities
doi.org/10.1162/imag...
Reposted by Arjun Dave
A new Python toolbox called HSSM simplifies working with Hierarchical Sequential Sampling Models (HSSMs) to understand how we accumulate evidence and make choices. Built on PyMC, Bambi, & ArviZ. Check it out! #cognitivescience #python #decisionmaking
edspace.american.edu/openbehavior...
edspace.american.edu/openbehavior...
January 31, 2025 at 7:04 PM
A new Python toolbox called HSSM simplifies working with Hierarchical Sequential Sampling Models (HSSMs) to understand how we accumulate evidence and make choices. Built on PyMC, Bambi, & ArviZ. Check it out! #cognitivescience #python #decisionmaking
edspace.american.edu/openbehavior...
edspace.american.edu/openbehavior...
Reposted by Arjun Dave
This book now available *open access* through Springer Neuromethods: link.springer.com/book/10.1007....
@brainalien.bsky.social and I extend heartfelt thanks to all contributing authors for their exceptional work, w/ special gratitude to Paul Thompson @ptenigma.bsky.social for an inspiring foreword
@brainalien.bsky.social and I extend heartfelt thanks to all contributing authors for their exceptional work, w/ special gratitude to Paul Thompson @ptenigma.bsky.social for an inspiring foreword
Methods for Analyzing Large Neuroimaging Datasets
This Open Access volume explores advancements in methodologies, efficient code management, and scalable data processing of neuroimaging datasets.
link.springer.com
January 13, 2025 at 12:05 PM
This book now available *open access* through Springer Neuromethods: link.springer.com/book/10.1007....
@brainalien.bsky.social and I extend heartfelt thanks to all contributing authors for their exceptional work, w/ special gratitude to Paul Thompson @ptenigma.bsky.social for an inspiring foreword
@brainalien.bsky.social and I extend heartfelt thanks to all contributing authors for their exceptional work, w/ special gratitude to Paul Thompson @ptenigma.bsky.social for an inspiring foreword
Reposted by Arjun Dave
✨📝 Special issue “What Makes a Good Theory? Interdisciplinary Perspectives”, edited by @irisvanrooij.bsky.social @devezer.bsky.social @jcskewes.bsky.social Sashank Varma & Todd Wareham in journal Computational
Brain & Behavior. link.springer.com/journal/4211... 🧪
Brain & Behavior. link.springer.com/journal/4211... 🧪
Computational Brain & Behavior | Volume 7, issue 4
Volume 7, issue 4 articles listing for Computational Brain & Behavior
link.springer.com
December 24, 2024 at 5:48 PM
✨📝 Special issue “What Makes a Good Theory? Interdisciplinary Perspectives”, edited by @irisvanrooij.bsky.social @devezer.bsky.social @jcskewes.bsky.social Sashank Varma & Todd Wareham in journal Computational
Brain & Behavior. link.springer.com/journal/4211... 🧪
Brain & Behavior. link.springer.com/journal/4211... 🧪
Reposted by Arjun Dave
www.biorxiv.org/content/10.1...
Between-movie variability severely limits generalizability of "naturalistic" neuroimaging.
Not sure about the (over)generalization to all of naturalistic neuroimaging, nor the claim that this severely limits the approach.
But definitely provides food for thought.
Between-movie variability severely limits generalizability of "naturalistic" neuroimaging.
Not sure about the (over)generalization to all of naturalistic neuroimaging, nor the claim that this severely limits the approach.
But definitely provides food for thought.
Between-movie variability severely limits generalizability of “naturalistic” neuroimaging
“Naturalistic imaging” paradigms, where participants watch movies during fMRI, have gained popularity over the past two decades. Many movie-watching studies measure inter-subject correlation (ISC), wh...
www.biorxiv.org
December 10, 2024 at 12:52 PM
www.biorxiv.org/content/10.1...
Between-movie variability severely limits generalizability of "naturalistic" neuroimaging.
Not sure about the (over)generalization to all of naturalistic neuroimaging, nor the claim that this severely limits the approach.
But definitely provides food for thought.
Between-movie variability severely limits generalizability of "naturalistic" neuroimaging.
Not sure about the (over)generalization to all of naturalistic neuroimaging, nor the claim that this severely limits the approach.
But definitely provides food for thought.
Reposted by Arjun Dave
Imaging intact human organs with local resolution of cellular structures using hierarchical phase-contrast tomography.
Amazing technique by Walsh et al: www.nature.com/articles/s41...
Amazing technique by Walsh et al: www.nature.com/articles/s41...
November 24, 2024 at 9:03 AM
Imaging intact human organs with local resolution of cellular structures using hierarchical phase-contrast tomography.
Amazing technique by Walsh et al: www.nature.com/articles/s41...
Amazing technique by Walsh et al: www.nature.com/articles/s41...
Reposted by Arjun Dave
𝗕𝗿𝗮𝗶𝗻 𝗿𝗲𝗴𝗶𝗼𝗻𝘀 𝗶𝗻𝘃𝗼𝗹𝘃𝗲𝗱 𝗶𝗻 𝘁𝗵𝗿𝗲𝗮𝘁/𝘀𝗮𝗳𝗲𝘁𝘆
In a previous fMRI study we use a broad set of regions. Are there other studies that have good sets of ROIs?
Are there some important regions missing from our set?
Thanks.
🧠
pmc.ncbi.nlm.nih.gov/articles/PMC...
In a previous fMRI study we use a broad set of regions. Are there other studies that have good sets of ROIs?
Are there some important regions missing from our set?
Thanks.
🧠
pmc.ncbi.nlm.nih.gov/articles/PMC...
November 13, 2024 at 5:12 PM
𝗕𝗿𝗮𝗶𝗻 𝗿𝗲𝗴𝗶𝗼𝗻𝘀 𝗶𝗻𝘃𝗼𝗹𝘃𝗲𝗱 𝗶𝗻 𝘁𝗵𝗿𝗲𝗮𝘁/𝘀𝗮𝗳𝗲𝘁𝘆
In a previous fMRI study we use a broad set of regions. Are there other studies that have good sets of ROIs?
Are there some important regions missing from our set?
Thanks.
🧠
pmc.ncbi.nlm.nih.gov/articles/PMC...
In a previous fMRI study we use a broad set of regions. Are there other studies that have good sets of ROIs?
Are there some important regions missing from our set?
Thanks.
🧠
pmc.ncbi.nlm.nih.gov/articles/PMC...