David Posada
@davidposada.bsky.social
40 followers 31 following 17 posts
An evolutionary biologist working in cancer evolution. Single-cell genomics, bioinformatics, anything phylo (phylogenetics, phylogeography, phylodynamics).
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davidposada.bsky.social
📢 PhD position at the Posada Lab!

🚀 Join us at the University of Vigo to track how tumor cells evolve, adapt, and survive using cutting-edge single-cell DNA/RNA tech. 4-year PhD, €134K total funding—apply by Nov 3, 2025.

👉 dposada.webs.uvigo.es/2025/10/07/p...
SRHI - Axudas FPI
sede.uvigo.gal
davidposada.bsky.social
🚨Our new study in Cellular Oncology🚨 shows high CTC genomic diversity & BCL9L mutations predict worse survival in metastatic colorectal cancer—supporting liquid biopsy for prognosis. 🎯🧬

Thanks to all co-authors!

doi.org/10.1007/s134...
Genomic diversity and BCL9L mutational status in circulating tumor cells predict overall survival in metastatic colorectal cancer - Cellular Oncology
Background Metastatic colorectal cancer (mCRC) remains a major cause of cancer-related mortality, but few noninvasive biomarkers exist to track disease progression or inform treatment strategies. Circulating tumor cells (CTCs) offer a minimally invasive source of tumor material, yet the prognostic significance of their genomic diversity remains unclear. Methods We conducted whole-exome sequencing of CTC pools from 29 mCRC patients to characterize their mutational landscape and assess associations with overall survival. Results Our analysis revealed substantial variation in mutational burden among patients, with all CTC pools harboring non-silent mutations in key CRC driver genes. Higher genomic diversity in CTC pools was significantly associated with reduced overall survival. Additionally, non-silent mutations in BCL9L emerged as a strong predictor of patient survival. Conclusion Genomic diversity and BCL9L mutational status in CTC pools emerged as strong predictors of survival in mCRC, underscoring the potential of CTC genomic profiling as a minimally invasive and clinically relevant prognostic tool in mCRC.
doi.org
davidposada.bsky.social
It was not something I heard, but something I saw: hope in their eyes
davidposada.bsky.social
It was a pleasure to join @aecc_es in Pontevedra for the World Cancer Research Day — talking with and listening to patients about the power of science and hope. Without research, there’s no cure. 💚 #ScienceIsHope"
davidposada.bsky.social
Big congrats Monica! so well-deserved! 👏
Reposted by David Posada
trevorgraham.bsky.social
Studying cancer evolution needs multi-region or single cell seq for phylogenetics, right? Amazingly (I think!) we found single-sample bulk methylation suffices, via analysis of "fluctuating methylation". In @nature.com today led by brilliant @calumgabbutt.bsky.social www.nature.com/articles/s41...
Fluctuating DNA methylation tracks cancer evolution at clinical scale - Nature
Cancer evolutionary dynamics are quantitatively inferred using a method, EVOFLUx, applied to fluctuating DNA methylation.
www.nature.com
davidposada.bsky.social
🚀 Excited to share our latest collaboration with Ewa Szczurek’s lab (@ewaszczurek.bsky.social) et al. in Genome Biology!

🧬 DelSIEVE: single-cell phylogeny from SNVs & indels 🧬

👉 rdcu.be/eCnL3

Big thanks to Senbai and Ewa for leading this project, and to all collaborators who made it possible! 🙌
DelSIEVE: cell phylogeny modeling of single nucleotide variants and deletions from single-cell DNA sequencing data
rdcu.be
davidposada.bsky.social
🎉 Last week, Nair successfully defended her Ph.D thesis on the genomic heterogeneity of circulating tumor cells and their role in metastasis! Her research sheds light on how cancer spreads. Huge congratulations to Nair on this outstanding achievement! 👏🧬
davidposada.bsky.social
🚨 New paper out in Cell Reports Methods! 🧬✨
After a long, long journey, we're thrilled to share our deep-dive into six single-cell whole-genome amplification (scWGA) methods.

🔍 TL;DR: no one-size-fits-all

Huge congrats to the whole team!

📝 doi.org/10.1016/j.cr...
doi.org
Reposted by David Posada
benross.bsky.social
Steve Kerr wore a Harvard basketball shirt after the Warriors’ win tonight: “Yes, this is me supporting Harvard. Way to go. Way to stand up to the bully.”
Reposted by David Posada
jeffreytownsend.bsky.social
"Many, and perhaps most, members of our academic community do not understand [the benefits of publishing] in society-based journals ... compared with for-profit journals from companies like Springer Nature, Frontiers, Wiley, and Elsevier." 🧪

academic.oup.com/mbe/article/...
academic.oup.com
Reposted by David Posada
trevorgraham.bsky.social
Our #Cancer #Evolution summer school runs again 30 June-3 July at the beautiful Genome Campus in Hinxton, UK sponsored by @wellcometrust.bsky.social

Ideal for starters in the field; this year's focus is on using genomic data for cancer evo research.

Brilliant & inspiring faculty! bit.ly/40nLdDD
Reposted by David Posada
ciccarellilab.bsky.social
We have two open positions for #computationalbiologists to work on:
1. Early cancer initiation following our work in #NatureCancer (Ref 5028)
2. Response to cancer immunotherapy following our work in #CancerCell (Ref 5073)
To apply use the provided reference numbers: www.qmul.ac.uk/jobs/vacanci...
davidposada.bsky.social
🎓 Como School on Cancer Evolution (CSCE 2025) for cutting-edge discussions on cancer biology, computational sciences, AI, and more! 🧬🌟 May 27-30, 2025, Villa del Grumello, Como, Italy 🇮🇹. Present your research & network with pioneers in the field. Register at: csce.lakecomoschool.org/registration/
Registration - Como School on Cancer Evolution 27-30 May 2025
Registration Registration: 400 EUR  (includes social dinner) On-premise, per-day registration: 120 EUR (social dinner not included) All fees include VAT. How to register Please fill in the form below ...
csce.lakecomoschool.org
davidposada.bsky.social
📢 Exciting news! Journal of Molecular Evolution meeting in Madrid, Aug 25-28, 2025! 🌍✨

✅ Free registration

🎙️ Talks + poster sessions

📅 Special AlphaFold symposium on Aug 28

🔗 Details & registration: www.mncn.csic.es/es/investiga...

Register by March 1, 2025 to secure your spot! 🧬
Journal of Molecular Evolution: A European Meeting | Museo Nacional de Ciencias Naturales
www.mncn.csic.es
davidposada.bsky.social
Enhorabuena @monikmarfer.bsky.social y a todo tu equipo, gran trabajo! 👏
davidposada.bsky.social
👋 Hello Bluesky! So glad to be here. I just deactivated my X account and look forward to connecting with you all. Happy 2025! 🎉