Hannah Knoll
@hannahknoll.bsky.social
Reposted by Hannah Knoll
gget hit >1,000 stars on GitHub!!! 🤯
Very grateful to all gget users and contributors for continuously helping us make bioinformatics databases and tools more accessible! ✨
github.com/pachterlab/g...
Very grateful to all gget users and contributors for continuously helping us make bioinformatics databases and tools more accessible! ✨
github.com/pachterlab/g...
March 12, 2025 at 1:57 PM
gget hit >1,000 stars on GitHub!!! 🤯
Very grateful to all gget users and contributors for continuously helping us make bioinformatics databases and tools more accessible! ✨
github.com/pachterlab/g...
Very grateful to all gget users and contributors for continuously helping us make bioinformatics databases and tools more accessible! ✨
github.com/pachterlab/g...
Reposted by Hannah Knoll
Reposted by Hannah Knoll
🧬 Meet Lyra, a new paradigm for accessible, powerful modeling of biological sequences. Lyra is a lightweight SSM achieving SOTA performance across DNA, RNA, and protein tasks—yet up to 120,000x smaller than foundation models (ESM, Evo). Bonus: you can train it on your Mac.
arxiv.org/abs/2503.16351
arxiv.org/abs/2503.16351
March 21, 2025 at 9:16 PM
🧬 Meet Lyra, a new paradigm for accessible, powerful modeling of biological sequences. Lyra is a lightweight SSM achieving SOTA performance across DNA, RNA, and protein tasks—yet up to 120,000x smaller than foundation models (ESM, Evo). Bonus: you can train it on your Mac.
arxiv.org/abs/2503.16351
arxiv.org/abs/2503.16351
Reposted by Hannah Knoll
Excited to share our new preprint “Establishing methods to monitor H5N1 influenza virus in dairy cattle milk”. A HUGE collaborative effort between the Sabeti lab @broadinstitute.org and the Mass DPH and MDAR 🧵👇 (1/n)
medrxiv.org/cgi/content/...
medrxiv.org/cgi/content/...
Establishing methods to monitor H5N1 influenza virus in dairy cattle milk
Highly Pathogenic Avian Influenza strain H5N1 has caused a multi-state outbreak among US dairy cattle, spreading across 15 states and infecting hundreds of herds since its onset. We rapidly developed ...
medrxiv.org
December 6, 2024 at 2:53 PM
Excited to share our new preprint “Establishing methods to monitor H5N1 influenza virus in dairy cattle milk”. A HUGE collaborative effort between the Sabeti lab @broadinstitute.org and the Mass DPH and MDAR 🧵👇 (1/n)
medrxiv.org/cgi/content/...
medrxiv.org/cgi/content/...