ilastik-team.bsky.social
@ilastik-team.bsky.social
1.1K followers 310 following 6 posts
Anna Kreshuk's lab and the team behind ilastik write here about their latest research in machine learning for microscopy. Also, new ilastik features and releases get announced here! @EMBL
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wkhuber.bsky.social
Join EMBL as a research group leader in AI in biology. EMBL AI is our new initiative aiming to exploit the full potential of ML/AI-based approaches to advance our understanding of the most complex system in the known universe - life on Earth.
embl.wd103.myworkdayjobs.com/en-US/EMBL/j...
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ai4life.bsky.social
The 2nd AI4Life Challenge is live!
Calling the AI & bioimaging community to tackle a key microscopy challenge: removing noise while preserving detail.

📦 Paired noisy/clean datasets
📈 Ground-truth evaluation
🧠 DL focus

Build, test, compete 👉 ai4life.eurobioimaging.eu/challenge-2/
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ai4life.bsky.social
🐾 The BioImage Model Zoo just got a major upgrade!

It has been fully redesigned, offering a new backend, model uploader, community curation tools, and integrated browser-based test runs powered by BioEngine. 🧪

Explore now 👉 bioimage.io
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florianjug.bsky.social
Another year, another #BIC Workshop!
This year at #ICCV 2025 in Honolulu, 🌺 🏄‍♀️ 🍹 🌼

Check it here: www.bioimagecomputing.com

Submission deadline: July 4th
Hey, you have a month left to submit your work!!! 👍
florianjug.bsky.social
Another year, another #BIC Workshop!
This year at #ECCV 2024 in Milan, 🇮🇹.

Check it out here: bioimagecomputing.com
Submission Deadline: July 19th 

Get your computational work out, we are looking forward to meet you in October!
🍕 🍷 👩‍🎓 👨‍🎓 ☀️
ilastik-team.bsky.social
New Contributors for this release: Oane Gros, Theodoros Katzalis, Jordan Matelsky, Aryan Kumar, Palak Kumari, Tanisha (tanisha25)

Big thanks to all users who gave us feedback and suggestions, and to @cziscience.bsky.social for the EOSS progam.
ilastik-team.bsky.social
New stable ilastik version 1.4.1 at www.ilastik.org/download!

Release Highlights:
- Support for OME-zarr (v0.4)
- New workflow - Trainable Domain Adaptation
- New object features based on Spherical Harmonics Feature, contributed by @grosoane.bsky.social.
- Native support for Apple Silicon
ilastik - Download
www.ilastik.org
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biologists.bsky.social
📆Deadline today: Friday, 4 April. Apply at bit.ly/4aXgFxq

#Microscopy #SciSky #ECR
Reposted by ilastik-team.bsky.social
ai4life.bsky.social
Big news for AI4Life! Our project is a success story by the European Commission! 🇪🇺
The Directorate-General for Research and Innovation (DG RTD) highlights our mission of making AI-powered bioimage analysis accessible to researchers everywhere 🌍
Read more: ai4life.eurobioimaging.eu/ai4life-high...
ilastik-team.bsky.social
If you have talented students in your team looking for a coding-heavy summer project, let them know that ilastik is participating in Google Summer of Code 2025! We are a sub-org under the Python Software Foundation. Come code with us as a (paid!) open source internship: github.com/btbest/gsoc-...
github.com
ilastik-team.bsky.social
Look at these beautiful new object features, now available in ilastik! Big thanks to Oane @grosoane.bsky.social for bringing them to all our users!
aafkegros.bsky.social
Now out in PLOS CB: Spherical Texture extraction! doi.org/10.1371/jour...

This method quantifies the intensity distribution in microscopy objects, and is implemented parameter-free in @ilastik-team.bsky.social object classification!

We show applications in cells, C. elegans and Drosophila! 😁
ilastik-team.bsky.social
A new format to ask all you ever wanted to ask about ilastik:
globias.bsky.social
Call 4 Help Pilot Event by GloBIAS, 22 Jan–5 Feb 2025! Offering life scientists a chance for hands-on guidance & support for #bioimage_analysis using Napari, Ilastik & CellProfiler.
💡 Details: www.globias.org/activities/c...
🔗 Sign up! Application until Friday 17 Jan: forms.gle/7hsJgramrFXB...
https://forms.gle/7hsJgramrFXBzCjk6]
ilastik-team.bsky.social
Hi everyone! Fulfilling our New Year's resolution to finally move away from X, and already finding so many old friends! Stay tuned for our news, everything will be here from now on.