Julia Beets
@juliabeets.bsky.social
57 followers 17 following 6 posts
PhD Student | FlyCADD | Genetic variation in life-history adaptation in Drosophila melanogaster | Single nucleotide polymorphisms | @ALIFE_VU VU Amsterdam
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juliabeets.bsky.social
Excited to attend #EDRC2025 in Alicante, starting today! If you want to know more about the impact of genetic variation, come visit my poster P-023 Saturday afternoon and learn about FlyCADD, our impact prediction tool for SNPs! 🧬
Reposted by Julia Beets
molbioevol.bsky.social
@jcbnunez.bsky.social et al. present an expanded release of the community-generated resource Drosophila Evolution over Space and Time (DEST 2.0), and showcase it by studying the species' demographic history and signatures of adaptation.

🔗 doi.org/10.1093/molbev/msaf132

#evobio #molbio #drosophila
MBE - Footprints of Worldwide Adaptation in Structured Populations of Drosophila melanogaster Through the Expanded DEST 2.0 Genomic Resource
juliabeets.bsky.social
Excited to be in Barcelona for #ESEB2025 ! If you want to know more about the application of FlyCADD for SNP impact prediction in D. melanogaster, I'll be presenting this work Tuesday 19th 12.45-1PM! Or catch our group at poster P02.334 to know more about the impact of SNPs 🧬☀️
juliabeets.bsky.social
FlyCADD was developed by applying the CADD framework (Kircher et al. 2014) for the first time to an insect genome, using available genome annotations for D. melanogaster and a drosophilid whole genome alignment.

All FlyCADD impact prediction scores are available on Zenodo!
juliabeets.bsky.social
FlyCADD provides impact prediction scores for any SNP on the D. melanogaster genome! We show FlyCADDs abilities in:
- ranking candidate SNPs (from GWAS/E&R) for variant prioritization
- interpretation of naturally occuring SNPs
- refining of CRISPR-Cas9 experimental design