The Matrisome Project
@matrisome.bsky.social
The Matrisome Project is a project led by Dr. Alexandra Naba and the Naba lab @nabalabuic.bsky.social to disseminate data, tools and reagents to advance #ECMatrix research.
Our goal: build an #ECMAtlas!
Our goal: build an #ECMAtlas!
Reposted by The Matrisome Project
📣 Publication alert: Our paper, “A guide to building the matrisome interactome: from computational predictions to experimental validation” is now published in @febsj.bsky.social!
📄 The paper is available in #OpenAccess at: doi.org/10.1111/febs...
#ECM #Matrisome #Interactome #SystemsBiology
📄 The paper is available in #OpenAccess at: doi.org/10.1111/febs...
#ECM #Matrisome #Interactome #SystemsBiology
November 25, 2025 at 2:10 AM
📣 Publication alert: Our paper, “A guide to building the matrisome interactome: from computational predictions to experimental validation” is now published in @febsj.bsky.social!
📄 The paper is available in #OpenAccess at: doi.org/10.1111/febs...
#ECM #Matrisome #Interactome #SystemsBiology
📄 The paper is available in #OpenAccess at: doi.org/10.1111/febs...
#ECM #Matrisome #Interactome #SystemsBiology
Reposted by The Matrisome Project
Data drop! We just released an updated list of anti-ECM antibodies curated from the #HumanBioMolecularAtlasProgram Organ Mapping Antibody Panels #OMAP and the 9th release of the Human Reference Atlas #HRA. Check it out: sites.google.com/uic.edu/matr...
July 15, 2025 at 12:16 AM
Data drop! We just released an updated list of anti-ECM antibodies curated from the #HumanBioMolecularAtlasProgram Organ Mapping Antibody Panels #OMAP and the 9th release of the Human Reference Atlas #HRA. Check it out: sites.google.com/uic.edu/matr...
Reposted by The Matrisome Project
Rijuta Lamba, Alexandra Naba @nabalabuic.bsky.social, @valerioizzi.bsky.social and team present MatriCom, a single-cell RNA-sequencing data mining tool to infer cell–ECM interactions.
Highlight: journals.biologists.com/jcs/article/...
Article: journals.biologists.com/jcs/article/...
#OpenAccess
Highlight: journals.biologists.com/jcs/article/...
Article: journals.biologists.com/jcs/article/...
#OpenAccess
July 16, 2025 at 8:59 AM
Rijuta Lamba, Alexandra Naba @nabalabuic.bsky.social, @valerioizzi.bsky.social and team present MatriCom, a single-cell RNA-sequencing data mining tool to infer cell–ECM interactions.
Highlight: journals.biologists.com/jcs/article/...
Article: journals.biologists.com/jcs/article/...
#OpenAccess
Highlight: journals.biologists.com/jcs/article/...
Article: journals.biologists.com/jcs/article/...
#OpenAccess
Reposted by The Matrisome Project
Perfect timing on the last day of the 2025 #Collagen Gordon Research Conference! Our paper, in collaboration with @valerioizzi.bsky.social describing #MatriCom, a tool to infer ECM communication systems from scRNA-Seq datasets, is now published in @jcellsci.bsky.social!
doi.org/10.1242/jcs....
doi.org/10.1242/jcs....
MatriCom, a single-cell RNA-sequencing data mining tool to infer cell–extracellular matrix interactions
Highlighted Article: MatriCom is a web application devised to mine single-cell RNA-sequencing datasets to infer extracellular matrix (ECM)–ECM and cell–ECM communication systems across cell population...
doi.org
July 11, 2025 at 4:03 PM
Perfect timing on the last day of the 2025 #Collagen Gordon Research Conference! Our paper, in collaboration with @valerioizzi.bsky.social describing #MatriCom, a tool to infer ECM communication systems from scRNA-Seq datasets, is now published in @jcellsci.bsky.social!
doi.org/10.1242/jcs....
doi.org/10.1242/jcs....
Reposted by The Matrisome Project
Congratulations to Pat Caswell (@integrintraffic.bsky.social) & Alexandra Naba (@matrisome.bsky.social) who will be vice-chairs of the 2027 Fibronectin, Integrins & Related Molecules GRC and chairs of the 2029 meeting!
May 8, 2025 at 12:09 PM
Congratulations to Pat Caswell (@integrintraffic.bsky.social) & Alexandra Naba (@matrisome.bsky.social) who will be vice-chairs of the 2027 Fibronectin, Integrins & Related Molecules GRC and chairs of the 2029 meeting!
Reposted by The Matrisome Project
Our manuscript describing #MatriCom, a web application we developed in collaboration with @valerioizzi.bsky.social to infer #ECM communication systems from #scRNASeq datasets is now available on @biorxivpreprint.bsky.social!
MatriCom: a scRNA-Seq data mining tool to infer ECM-ECM and cell-ECM communication systems https://www.biorxiv.org/content/10.1101/2024.12.10.627834v1
December 17, 2024 at 3:18 AM
Our manuscript describing #MatriCom, a web application we developed in collaboration with @valerioizzi.bsky.social to infer #ECM communication systems from #scRNASeq datasets is now available on @biorxivpreprint.bsky.social!
Reposted by The Matrisome Project
MatriCom: a scRNA-Seq data mining tool to infer ECM-ECM and cell-ECM communication systems https://www.biorxiv.org/content/10.1101/2024.12.10.627834v1
December 17, 2024 at 1:10 AM
MatriCom: a scRNA-Seq data mining tool to infer ECM-ECM and cell-ECM communication systems https://www.biorxiv.org/content/10.1101/2024.12.10.627834v1