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Matthieu Montes

@matthieumontes.bsky.social

200 followers 270 following 29 posts

Professor detached@CNRS/Sorbonne Université, ERC and IUF fellow, co-founder@qubit_pharma, structural bioinformatics, Chemoinformatics, molecular visualization

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Matthieu Montes @matthieumontes.bsky.social · May 14

New publication out!
doi.org/10.1093/bioi...

VTX is open source and freely accessible for non commercial use! github.com/VTX-Molecula...

Builds available at vtx.drugdesign.fr

GitHub - VTX-Molecular-Visualization/VTX

Contribute to VTX-Molecular-Visualization/VTX development by creating an account on GitHub.

github.com

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Reposted by Matthieu Montes

Ezgi Karaca @ezgikaraca.bsky.social · 2d

And the legacy continues! 😊

@amjjbonvin.bsky.social @bioinfo.se @lindorfflarsen.bsky.social #EMBOIntegMod25 ! 🍀🧿

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Matthieu Montes @matthieumontes.bsky.social · 6d

We ll check thanks for the suggestion!

Reposted by Matthieu Montes

Marc Lensink @marclensink.bsky.social · 9d

And we're off

The EMBO IntegMod Course has started. All participants received their own mug.

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Matthieu Montes @matthieumontes.bsky.social · 10d

Ho 🤩 I look forward to taste your production! See you very soon!

Matthieu Montes @matthieumontes.bsky.social · 11d

Thanks @ezgikaraca.bsky.social ! Same here!

Matthieu Montes @matthieumontes.bsky.social · 11d

Going to Izmir for the meetings.embo.org/event/25-bio...
I will talk on monday about interactive molecular visualization and simulation methods! See you there!
Thanks to the organizers for the invitation! @ezgikaraca.bsky.social @amjjbonvin.bsky.social @bioinfo.se @lindorfflarsen.bsky.social

Integrative modelling of biomolecular interactions

Experimental structural studies of interactions can be costly, low-throughput, and challenging. Therefore, computational methods aiming to model protein complexes are particularly valuable. The accur…

meetings.embo.org

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Matthieu Montes @matthieumontes.bsky.social · 14d

A junior chair professor position in computer science / chemoinformatics / structural bioinformatics is available in my former team in CNAM, Paris, France

Please contact Nathalie Lagarde for more details ([email protected])

Annonce_CPJ_Cnam | Nathalie Lagarde

Un poste de Chaire de Professeur Junior (CPJ) est ouvert dans notre équipe de bioinformatique structurale appartenant au laboratoire GBCM du Conservatoire National des Arts et Métiers (Paris). 👉 Profi...

www.linkedin.com

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Matthieu Montes @matthieumontes.bsky.social · 28d

Bisous copain 😘

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Reposted by Matthieu Montes

Ezgi Karaca @ezgikaraca.bsky.social · Jun 11

Only a few days left to apply for our EMBO course with a great lineup of speakers and tutors! Please feel free to RT!

Course website: meetings.embo.org/event/25-bio...

Organizers: myself, @amjjbonvin.bsky.social @bioinfo.se @lindorfflarsen.bsky.social

Location: www.ibg.edu.tr

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Matthieu Montes @matthieumontes.bsky.social · Jun 10

We can think about it 😁 thanks a lot Joao!

Matthieu Montes @matthieumontes.bsky.social · Jun 10

New paper out www.frontiersin.org/journals/bio...

VTX is available at github.com/VTX-Molecula...

@cg-martini.bsky.social @janstevens.bsky.social

@maximemaria.bsky.social @sguionni.bsky.social @pltc.bsky.social @qubit-pharma.bsky.social

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Matthieu Montes @matthieumontes.bsky.social · Jun 9

Yes, sorry. I couldn't edit the post so I have put the link in the discussion

Matthieu Montes @matthieumontes.bsky.social · Jun 9

Je peux pas éditer le post 😔 mais j'ai mis le lien en dessous

Matthieu Montes @matthieumontes.bsky.social · Jun 9

www.frontiersin.org/journals/bio...

Frontiers | Interactive visualization of large molecular systems with VTX: example with a minimal whole-cell model

VTX is an open-source molecular visualization software designed to overcome the scaling limitations of existing real-time molecular visualization software wh...

www.frontiersin.org

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Matthieu Montes @matthieumontes.bsky.social · Jun 9

github.com/VTX-Molecula...

GitHub - VTX-Molecular-Visualization/VTX

Contribute to VTX-Molecular-Visualization/VTX development by creating an account on GitHub.

github.com

Matthieu Montes @matthieumontes.bsky.social · May 14

New publication out!
doi.org/10.1093/bioi...

VTX is open source and freely accessible for non commercial use! github.com/VTX-Molecula...

Builds available at vtx.drugdesign.fr

GitHub - VTX-Molecular-Visualization/VTX

Contribute to VTX-Molecular-Visualization/VTX development by creating an account on GitHub.

github.com

2 3 15

Matthieu Montes @matthieumontes.bsky.social · May 9

And a super cool video produced with VTX by @maximemaria.bsky.social

Reposted by Matthieu Montes

Jean-Philip Piquemal @jppiquem.bsky.social · May 9

1/3 #compchem Preprint: "Pushing the Accuracy Limit of Foundation Neural Network Models with Quantum Monte Carlo Forces & Path Integrals"
💫: arxiv.org/abs/2504.07948
An end-to-end multi-level exascale strategy to produce highly accurate quantum chemistry datasets (energies & forces): DFT/QMC/sCI.

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Matthieu Montes @matthieumontes.bsky.social · May 2

New paper out pubs.acs.org/doi/abs/10.1...

Combining Molecular Docking and Pharmacophore Models Predicts Ligand Binding of Endocrine-Disrupting Chemicals to Nuclear Receptors

Nuclear receptors form a family of proteins capable of accommodating a wide variety of small molecules in their ligand binding domain, ranging from therapeutic compounds to endocrine-disrupting chemic...

pubs.acs.org

Matthieu Montes @matthieumontes.bsky.social · Mar 25

Talked about VTX and UDock at the Scripps yesterday, thanks @ludovicautin.bsky.social for the invitation and to Stefano Forli, Arthur Olson and Michel Sanner for the warm welcome and the great discussions! Next stop, Chicago!

Matthieu Montes @matthieumontes.bsky.social · Mar 19

Presenting UDock2 and recent developments on VTX at the APS meeting in Anaheim! Very rich interactions, thanks to the organizers for the invitation!

Matthieu Montes @matthieumontes.bsky.social · Mar 15

Exciting day yesterday at Mizzou where I presented our recent advances in molecular simulation and visualization and had super cool exchanges with the faculty and students in physics, comp sci and biochemistry departments. Thanks to Prof Xiaoqing Zou for the invitation! Next stop Anaheim

Matthieu Montes @matthieumontes.bsky.social · Mar 15

Bon courage!

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Matthieu Montes @matthieumontes.bsky.social · Mar 11

New pre-print from the team! Interactive visualization of large molecular systems with VTX: example with a minimal whole-cell model from @cg-martini.bsky.social

arxiv.org/abs/2503.07181
VTX is available on GitHub github.com/VTX-Molecula... and at vtx.drugdesign.fr

Interactive visualization of large molecular systems with VTX: example with a minimal whole-cell model

VTX is an open-source molecular visualization software designed to overcome the scaling limitations of existing real-time molecular visualization software when handling massive molecular datasets. VTX...

arxiv.org

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Matthieu Montes @matthieumontes.bsky.social · Feb 28

Presented UDock and VTX today at Loria in Nancy, thanks Yasaman Karami and Ahmed Khakzad for the kind invitation!

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